Information for 6-GYTCTGTCATTTGNHA (Motif 13)

A T C G G A T C G C A T A G T C C G A T A C T G G A C T A T G C G C T A C G A T A G C T A C G T C A T G G A T C G C T A C G T A
Reverse Opposite:
C G A T C G A T C T A G G T A C C G T A C T G A C G T A C A G T A T C G C T G A G T A C C G T A A C T G C G T A C T A G T A G C
p-value:1e-11
log p-value:-2.681e+01
Information Content per bp:1.647
Number of Target Sequences with motif19.0
Percentage of Target Sequences with motif2.26%
Number of Background Sequences with motif124.5
Percentage of Background Sequences with motif0.26%
Average Position of motif in Targets51.4 +/- 23.9bp
Average Position of motif in Background46.9 +/- 26.0bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

MEIS2/MA0774.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:GYTCTGTCATTTGNHA
--GCTGTCAA------
 A T C G G A T C G C A T A G T C C G A T A C T G G A C T A T G C G C T A C G A T A G C T A C G T C A T G G A T C G C T A C G T A
A C G T A C G T A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:GYTCTGTCATTTGNHA
---CTGACCTTTG---
 A T C G G A T C G C A T A G T C C G A T A C T G G A C T A T G C G C T A C G A T A G C T A C G T C A T G G A T C G C T A C G T A
A C G T A C G T A C G T A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:GYTCTGTCATTTGNHA
--CCTGTCAA------
 A T C G G A T C G C A T A G T C C G A T A C T G G A C T A T G C G C T A C G A T A G C T A C G T C A T G G A T C G C T A C G T A
A C G T A C G T T A G C T G A C G A C T C T A G G A C T A T G C C G T A G C T A A C G T A C G T A C G T A C G T A C G T A C G T

PH0141.1_Pknox2/Jaspar

Match Rank:4
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---GYTCTGTCATTTGNHA
AAGCACCTGTCAATAT---
 A C G T A C G T A C G T A T C G G A T C G C A T A G T C C G A T A C T G G A C T A T G C G C T A C G A T A G C T A C G T C A T G G A T C G C T A C G T A
G C T A C T G A T C A G A T G C T C G A T A G C G T A C A G C T A C T G G A C T A G T C C T G A G T C A G C A T G C T A A G C T A C G T A C G T A C G T

MEIS1/MA0498.2/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:GYTCTGTCATTTGNHA
---NTGTCAN------
 A T C G G A T C G C A T A G T C C G A T A C T G G A C T A T G C G C T A C G A T A G C T A C G T C A T G G A T C G C T A C G T A
A C G T A C G T A C G T G A T C G A C T C T A G A C G T A T G C C G T A C G T A A C G T A C G T A C G T A C G T A C G T A C G T

Tgif2(Homeobox)/mES-Tgif2-ChIP-Seq(GSE55404)/Homer

Match Rank:6
Score:0.60
Offset:4
Orientation:forward strand
Alignment:GYTCTGTCATTTGNHA
----TGTCANYT----
 A T C G G A T C G C A T A G T C C G A T A C T G G A C T A T G C G C T A C G A T A G C T A C G T C A T G G A T C G C T A C G T A
A C G T A C G T A C G T A C G T A G C T C A T G G C A T G A T C T G C A C T A G G A T C A C G T A C G T A C G T A C G T A C G T

POL009.1_DCE_S_II/Jaspar

Match Rank:7
Score:0.59
Offset:2
Orientation:forward strand
Alignment:GYTCTGTCATTTGNHA
--GCTGTG--------
 A T C G G A T C G C A T A G T C C G A T A C T G G A C T A T G C G C T A C G A T A G C T A C G T C A T G G A T C G C T A C G T A
A C G T A C G T T A C G T A G C C A G T A T C G G A C T A T C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PRDM1/MA0508.1/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:GYTCTGTCATTTGNHA
TCACTTTCACTTTCN-
 A T C G G A T C G C A T A G T C C G A T A C T G G A C T A T G C G C T A C G A T A G C T A C G T C A T G G A T C G C T A C G T A
G A C T G A T C T G C A A G T C G C A T G A C T A C G T A G T C G T C A G A T C A G C T A G C T G A C T G A T C G C A T A C G T

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:GYTCTGTCATTTGNHA
-GYCTGGYYTNTGTCA
 A T C G G A T C G C A T A G T C C G A T A C T G G A C T A T G C G C T A C G A T A G C T A C G T C A T G G A T C G C T A C G T A
A C G T A T C G A G C T A G T C A C G T A C T G A T C G A G C T G A C T G C A T A G C T G A C T T A C G A G C T G A T C G C T A

PH0169.1_Tgif1/Jaspar

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---GYTCTGTCATTTGNHA
NNNCAGCTGTCAATATN--
 A C G T A C G T A C G T A T C G G A T C G C A T A G T C C G A T A C T G G A C T A T G C G C T A C G A T A G C T A C G T C A T G G A T C G C T A C G T A
G C T A T G A C A T C G A T G C T G C A A T C G G A T C A G C T A C T G C G A T A G T C C G T A G C T A C G A T T G C A G A C T G T A C A C G T A C G T