Information for 5-CATTTTAAAATGAGAR (Motif 11)

G T A C T C G A A C G T A C G T A C G T A G C T C T G A C G T A G T C A C G T A A C G T A C T G C G T A C A T G G T C A C T G A
Reverse Opposite:
A G C T A C G T G T A C G C A T G T A C C G T A A C G T A C G T A C G T A G C T C T G A G T C A C G T A G T C A A G C T C A T G
p-value:1e-13
log p-value:-3.088e+01
Information Content per bp:1.767
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.71%
Number of Background Sequences with motif0.6
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.1 +/- 31.2bp
Average Position of motif in Background91.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0132.1_Hbp1_2/Jaspar

Match Rank:1
Score:0.66
Offset:1
Orientation:reverse strand
Alignment:CATTTTAAAATGAGAR--
-NNTNNACAATGGGANNN
 G T A C T C G A A C G T A C G T A C G T A G C T C T G A C G T A G T C A C G T A A C G T A C T G C G T A C A T G G T C A C T G A A C G T A C G T
A C G T C G T A T A C G A G C T C G T A A G T C G T C A G T A C C G T A C G T A C G A T C T A G C T A G A C T G T C G A G T C A G A T C G C T A

LIN54/MA0619.1/Jaspar

Match Rank:2
Score:0.63
Offset:1
Orientation:reverse strand
Alignment:CATTTTAAAATGAGAR
-NATTCAAAT------
 G T A C T C G A A C G T A C G T A C G T A G C T C T G A C G T A G T C A C G T A A C G T A C T G C G T A C A T G G T C A C T G A
A C G T C T G A C T G A A C G T A C G T A G T C C T G A C G T A C G T A G C A T A C G T A C G T A C G T A C G T A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:3
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CATTTTAAAATGAGAR
CGGTTTCAAA------
 G T A C T C G A A C G T A C G T A C G T A G C T C T G A C G T A G T C A C G T A A C G T A C T G C G T A C A T G G T C A C T G A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A A C G T A C G T A C G T A C G T A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CATTTTAAAATGAGAR
CAATTGCAAAAATAT--
 A C G T G T A C T C G A A C G T A C G T A C G T A G C T C T G A C G T A G T C A C G T A A C G T A C T G C G T A C A T G G T C A C T G A
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

CEBPA/MA0102.3/Jaspar

Match Rank:5
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CATTTTAAAATGAGAR
-ATTGCACAATA----
 G T A C T C G A A C G T A C G T A C G T A G C T C T G A C G T A G T C A C G T A A C G T A C T G C G T A C A T G G T C A C T G A
A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A A C G T A C G T A C G T A C G T

PB0174.1_Sox30_2/Jaspar

Match Rank:6
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CATTTTAAAATGAGAR
NCGTATTATAATCNTA-
 A C G T G T A C T C G A A C G T A C G T A C G T A G C T C T G A C G T A G T C A C G T A A C G T A C T G C G T A C A T G G T C A C T G A
A T G C A G T C A C T G A C G T G T C A C G A T A G C T G T C A A C G T T C G A C G T A C A G T T G A C G C A T C A G T C T G A A C G T

Pax7(Paired,Homeobox),longest/Myoblast-Pax7-ChIP-Seq(GSE25064)/Homer

Match Rank:7
Score:0.56
Offset:-2
Orientation:forward strand
Alignment:--CATTTTAAAATGAGAR--
NTAATTDGCYAATTANNWWD
 A C G T A C G T G T A C T C G A A C G T A C G T A C G T A G C T C T G A C G T A G T C A C G T A A C G T A C T G C G T A C A T G G T C A C T G A A C G T A C G T
G A C T G A C T T C G A C G T A C G A T A G C T C T G A A C T G T G A C G A C T T C G A C G T A A C G T A G C T C T G A C T G A G T C A G C T A G C T A C G T A

Arid5a/MA0602.1/Jaspar

Match Rank:8
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CATTTTAAAATGAGAR
NNTNNCAATATTAG--
 G T A C T C G A A C G T A C G T A C G T A G C T C T G A C G T A G T C A C G T A A C G T A C T G C G T A C A T G G T C A C T G A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

PB0002.1_Arid5a_1/Jaspar

Match Rank:9
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CATTTTAAAATGAGAR
NNTNNCAATATTAG--
 G T A C T C G A A C G T A C G T A C G T A G C T C T G A C G T A G T C A C G T A A C G T A C T G C G T A C A T G G T C A C T G A
C G A T G C A T G A C T G C T A A C T G G A T C C T G A C G T A C G A T G C T A G C A T G A C T C T G A A T C G A C G T A C G T

HOXD11/MA0908.1/Jaspar

Match Rank:10
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CATTTTAAAATGAGAR
-GTCGTAAAAA-----
 G T A C T C G A A C G T A C G T A C G T A G C T C T G A C G T A G T C A C G T A A C G T A C T G C G T A C A T G G T C A C T G A
A C G T T C A G A C G T G A T C C T A G C G A T C G T A C G T A G C T A G C T A G C T A A C G T A C G T A C G T A C G T A C G T