Information for 8-CCWGMYAGCCRGGGMC (Motif 8)

A G T C A G T C G C A T A C T G G T C A A G T C C G T A A C T G A G T C A G T C C T G A A C T G A C T G A C T G T G C A A G T C
Reverse Opposite:
A C T G A C G T A G T C A G T C A G T C G A C T A C T G A C T G A G T C A C G T C T A G A C G T A G T C C G T A A C T G A C T G
p-value:1e-10
log p-value:-2.464e+01
Information Content per bp:1.869
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.57%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets54.8 +/- 21.5bp
Average Position of motif in Background57.8 +/- 22.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:1
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCWGMYAGCCRGGGMC
SCAGYCADGCATGAC-
 A G T C A G T C G C A T A C T G G T C A A G T C C G T A A C T G A G T C A G T C C T G A A C T G A C T G A C T G T G C A A G T C
A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C A C G T

Zfx/MA0146.2/Jaspar

Match Rank:2
Score:0.53
Offset:4
Orientation:forward strand
Alignment:CCWGMYAGCCRGGGMC--
----GGGGCCGAGGCCTG
 A G T C A G T C G C A T A C T G G T C A A G T C C G T A A C T G A G T C A G T C C T G A A C T G A C T G A C T G T G C A A G T C A C G T A C G T
A C G T A C G T A C G T A C G T A T C G A T C G T A C G C T A G A T G C G A T C A C T G T G C A T C A G A T C G A G T C A G T C A G C T T A C G

Tlx?(NR)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:3
Score:0.52
Offset:-2
Orientation:reverse strand
Alignment:--CCWGMYAGCCRGGGMC
TGGCAGNCTGCCAG----
 A C G T A C G T A G T C A G T C G C A T A C T G G T C A A G T C C G T A A C T G A G T C A G T C C T G A A C T G A C T G A C T G T G C A A G T C
C A G T A C T G A T C G T G A C G C T A A C T G T A G C G T A C C G A T A C T G T A G C G T A C G C T A T C A G A C G T A C G T A C G T A C G T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:4
Score:0.51
Offset:2
Orientation:reverse strand
Alignment:CCWGMYAGCCRGGGMC-
--DCHCAGCAGGRGGCC
 A G T C A G T C G C A T A C T G G T C A A G T C C G T A A C T G A G T C A G T C C T G A A C T G A C T G A C T G T G C A A G T C A C G T
A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

POL010.1_DCE_S_III/Jaspar

Match Rank:5
Score:0.51
Offset:5
Orientation:forward strand
Alignment:CCWGMYAGCCRGGGMC
-----CAGCC------
 A G T C A G T C G C A T A C T G G T C A A G T C C G T A A C T G A G T C A G T C C T G A A C T G A C T G A C T G T G C A A G T C
A C G T A C G T A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2A/MA0003.3/Jaspar

Match Rank:6
Score:0.51
Offset:6
Orientation:reverse strand
Alignment:CCWGMYAGCCRGGGMC-
------NGCCTGAGGCN
 A G T C A G T C G C A T A C T G G T C A A G T C C G T A A C T G A G T C A G T C C T G A A C T G A C T G A C T G T G C A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A T G

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:7
Score:0.50
Offset:0
Orientation:reverse strand
Alignment:CCWGMYAGCCRGGGMC
CCAGACAG--------
 A G T C A G T C G C A T A C T G G T C A A G T C C G T A A C T G A G T C A G T C C T G A A C T G A C T G A C T G T G C A A G T C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFAP2B(var.2)/MA0812.1/Jaspar

Match Rank:8
Score:0.50
Offset:6
Orientation:reverse strand
Alignment:CCWGMYAGCCRGGGMC-
------TGCCTGAGGCN
 A G T C A G T C G C A T A C T G G T C A A G T C C G T A A C T G A G T C A G T C C T G A A C T G A C T G A C T G T G C A A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T A T C G A T G C A G T C A C G T A T C G T C G A T C A G A T C G A T G C C A G T

Zfp809(Zf)/ES-Zfp809-ChIP-Seq(GSE70799)/Homer

Match Rank:9
Score:0.49
Offset:0
Orientation:forward strand
Alignment:CCWGMYAGCCRGGGMC
GGGGCTYGKCTGGGA-
 A G T C A G T C G C A T A C T G G T C A A G T C C G T A A C T G A G T C A G T C C T G A A C T G A C T G A C T G T G C A A G T C
C T A G C A T G C A T G T A C G A G T C G C A T A G C T C T A G A C G T A G T C G A C T A C T G A C T G A C T G T C G A A C G T

ZNF165(Zf)/WHIM12-ZNF165-ChIP-Seq(GSE65937)/Homer

Match Rank:10
Score:0.49
Offset:6
Orientation:reverse strand
Alignment:CCWGMYAGCCRGGGMC-----
------TGCCTGCGYCMCCTT
 A G T C A G T C G C A T A C T G G T C A A G T C C G T A A C T G A G T C A G T C C T G A A C T G A C T G A C T G T G C A A G T C A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T C A G T A C T G A G T C A G T C A C G T A C T G A T G C C T A G A G T C G A T C G T C A A G T C A G T C G C A T A C G T