p-value: | 1e-3 |
log p-value: | -8.637e+00 |
Information Content per bp: | 1.842 |
Number of Target Sequences with motif | 2.0 |
Percentage of Target Sequences with motif | 0.23% |
Number of Background Sequences with motif | 0.0 |
Percentage of Background Sequences with motif | 0.00% |
Average Position of motif in Targets | 55.5 +/- 24.7bp |
Average Position of motif in Background | 0.0 +/- 0.0bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 2.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
PB0157.1_Rara_2/Jaspar
Match Rank: | 1 |
Score: | 0.73 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGACCCWRYRCTRSTC NNCNTGACCCCGCTCT---- |
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PB0153.1_Nr2f2_2/Jaspar
Match Rank: | 2 |
Score: | 0.68 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGACCCWRYRCTRSTC NNNNTGACCCGGCGCG---- |
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PB0057.1_Rxra_1/Jaspar
Match Rank: | 3 |
Score: | 0.67 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----TGACCCWRYRCTRSTC TGTCGTGACCCCTTAAT---- |
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MF0004.1_Nuclear_Receptor_class/Jaspar
Match Rank: | 4 |
Score: | 0.65 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCCWRYRCTRSTC TGACCT---------- |
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PB0030.1_Hnf4a_1/Jaspar
Match Rank: | 5 |
Score: | 0.62 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TGACCCWRYRCTRSTC NNANTTGACCCCTNNNN---- |
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COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer
Match Rank: | 6 |
Score: | 0.61 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCCWRYRCTRSTC TGACCYCT-------- |
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THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer
Match Rank: | 7 |
Score: | 0.59 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCCWRYRCTRSTC TGACCTYA-------- |
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PB0118.1_Esrra_2/Jaspar
Match Rank: | 8 |
Score: | 0.58 |
Offset: | -5 |
Orientation: | reverse strand |
Alignment: | -----TGACCCWRYRCTRSTC NNNNTTGACCCCTNNNN---- |
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RORA/MA0071.1/Jaspar
Match Rank: | 9 |
Score: | 0.56 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | TGACCCWRYRCTRSTC TGACCTTGAT------ |
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NR2F1/MA0017.2/Jaspar
Match Rank: | 10 |
Score: | 0.56 |
Offset: | -4 |
Orientation: | reverse strand |
Alignment: | ----TGACCCWRYRCTRSTC CNNTTGACCTTTG------- |
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