Information for 13-TGGACAGAGTTGA (Motif 18)

A C G T A C T G A C T G C G T A A G T C C T G A A C T G C G T A A C T G A C G T A G C T A C T G C T G A
Reverse Opposite:
A G C T A G T C C T G A C G T A A G T C A C G T A G T C A G C T A C T G A C G T A G T C A G T C C G T A
p-value:1e-8
log p-value:-1.906e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets25.5 +/- 32.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pparg::Rxra/MA0065.2/Jaspar

Match Rank:1
Score:0.54
Offset:-2
Orientation:forward strand
Alignment:--TGGACAGAGTTGA
GTAGGGCAAAGGTCA
 A C G T A C G T A C G T A C T G A C T G C G T A A G T C C T G A A C T G C G T A A C T G A C G T A G C T A C T G C T G A
A T C G A G C T C T G A C T A G C T A G C A T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C G C T A

MEIS2/MA0774.1/Jaspar

Match Rank:2
Score:0.53
Offset:0
Orientation:forward strand
Alignment:TGGACAGAGTTGA
TTGACAGC-----
 A C G T A C T G A C T G C G T A A G T C C T G A A C T G C G T A A C T G A C G T A G C T A C T G C T G A
C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C A C G T A C G T A C G T A C G T A C G T

NR2C2/MA0504.1/Jaspar

Match Rank:3
Score:0.53
Offset:-2
Orientation:forward strand
Alignment:--TGGACAGAGTTGA
AGGGGTCAGAGGTCA
 A C G T A C G T A C G T A C T G A C T G C G T A A G T C C T G A A C T G C G T A A C T G A C G T A G C T A C T G C T G A
T G C A T C A G T C A G A C T G C A T G C A G T A T G C C T G A C T A G C T G A C T A G C A T G A C G T A G T C C T G A

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:4
Score:0.52
Offset:-3
Orientation:forward strand
Alignment:---TGGACAGAGTTGA
CANAGNNCAAAGTCCA
 A C G T A C G T A C G T A C G T A C T G A C T G C G T A A G T C C T G A A C T G C G T A A C T G A C G T A G C T A C T G C T G A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A

TR4(NR),DR1/Hela-TR4-ChIP-Seq(GSE24685)/Homer

Match Rank:5
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGGACAGAGTTGA
GAGGTCAAAGGTCA
 A C G T A C G T A C T G A C T G C G T A A G T C C T G A A C T G C G T A A C T G A C G T A G C T A C T G C T G A
T C A G C T G A C T A G C A T G A C G T A T G C C T G A C T G A C T G A C T A G C A T G A C G T A T G C C T G A

RXR(NR),DR1/3T3L1-RXR-ChIP-Seq(GSE13511)/Homer

Match Rank:6
Score:0.52
Offset:-1
Orientation:forward strand
Alignment:-TGGACAGAGTTGA
TAGGGCAAAGGTCA
 A C G T A C G T A C T G A C T G C G T A A G T C C T G A A C T G C G T A A C T G A C G T A G C T A C T G C T G A
A G C T C T G A C T A G C T A G A C T G T A G C T G C A T C G A C T G A C T A G C A T G A C G T A T G C T C G A

HNF4G/MA0484.1/Jaspar

Match Rank:7
Score:0.52
Offset:-2
Orientation:forward strand
Alignment:--TGGACAGAGTTGA
AGAGTCCAAAGTCCA
 A C G T A C G T A C G T A C T G A C T G C G T A A G T C C T G A A C T G C G T A A C T G A C G T A G C T A C T G C T G A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A

MEIS3/MA0775.1/Jaspar

Match Rank:8
Score:0.51
Offset:0
Orientation:forward strand
Alignment:TGGACAGAGTTGA
TTGACAGG-----
 A C G T A C T G A C T G C G T A A G T C C T G A A C T G C G T A A C T G A C G T A G C T A C T G C T G A
C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:9
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--TGGACAGAGTTGA
RGKGGGCGGAGC---
 A C G T A C G T A C G T A C T G A C T G C G T A A G T C C T G A A C T G C G T A A C T G A C G T A G C T A C T G C T G A
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T

Hnf4a/MA0114.3/Jaspar

Match Rank:10
Score:0.51
Offset:-1
Orientation:forward strand
Alignment:-TGGACAGAGTTGA--
GGGGTCAAAGTCCAAT
 A C G T A C G T A C T G A C T G C G T A A G T C C T G A A C T G C G T A A C T G A C G T A G C T A C T G C T G A A C G T A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T