Information for 12-ACGCAGCATGGCA (Motif 17)

C G T A A G T C A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C T G A C T G A G T C C G T A
Reverse Opposite:
A C G T A C T G A G T C A G T C C G T A A C G T A C T G A G T C A C G T A C T G A G T C A C T G A C G T
p-value:1e-8
log p-value:-1.906e+01
Information Content per bp:1.530
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.46%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets42.2 +/- 20.0bp
Average Position of motif in Background82.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0206.1_Zic2_2/Jaspar

Match Rank:1
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--ACGCAGCATGGCA
CCACACAGCAGGAGA
 A C G T A C G T C G T A A G T C A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C T G A C T G A G T C C G T A
G A T C G A T C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

PB0207.1_Zic3_2/Jaspar

Match Rank:2
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ACGCAGCATGGCA
GAGCACAGCAGGACA
 A C G T A C G T C G T A A G T C A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C T G A C T G A G T C C G T A
C A T G C G T A C T A G T G A C C T G A A G T C C G T A C T A G A G T C C T G A A C T G A C T G G T C A T A G C C G T A

PB0205.1_Zic1_2/Jaspar

Match Rank:3
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--ACGCAGCATGGCA
CCACACAGCAGGAGA
 A C G T A C G T C G T A A G T C A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C T G A C T G A G T C C G T A
A G T C G T A C C G T A T G A C T C G A A G T C G C T A C T A G A G T C C T G A A C T G A C T G G T C A T C A G C G T A

Zic(Zf)/Cerebellum-ZIC1.2-ChIP-Seq(GSE60731)/Homer

Match Rank:4
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:ACGCAGCATGGCA
DCTCAGCAGG---
 C G T A A G T C A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C T G A C T G A G T C C G T A
C A G T G T A C G C A T A G T C G C T A A C T G A G T C C T G A A C T G A C T G A C G T A C G T A C G T

PB0147.1_Max_2/Jaspar

Match Rank:5
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:ACGCAGCATGGCA-
NNGTCGCGTGNCAC
 C G T A A G T C A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C T G A C T G A G T C C G T A A C G T
G T A C G C T A A C T G A G C T T G A C C T A G A G T C T C A G G A C T A C T G C T A G G T A C T C G A T G A C

Unknown-ESC-element(?)/mES-Nanog-ChIP-Seq(GSE11724)/Homer

Match Rank:6
Score:0.60
Offset:1
Orientation:forward strand
Alignment:ACGCAGCATGGCA
-CACAGCAGGGGG
 C G T A A G T C A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C T G A C T G A G T C C G T A
A C G T T G A C G C T A T G A C C G T A T C A G G A T C C G T A C A T G C A T G C T A G C T A G C T A G

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:7
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ACGCAGCATGGCA--
DCHCAGCAGGRGGCC
 C G T A A G T C A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C T G A C T G A G T C C G T A A C G T A C G T
C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

YY1/MA0095.2/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:ACGCAGCATGGCA--
---CAAGATGGCGGC
 C G T A A G T C A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C T G A C T G A G T C C G T A A C G T A C G T
A C G T A C G T A C G T T G A C C T G A T C G A T C A G C G T A A G C T C T A G C T A G G T A C A C T G T C A G G T A C

PB0029.1_Hic1_1/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:ACGCAGCATGGCA----
-NGTAGGTTGGCATNNN
 C G T A A G T C A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C T G A C T G A G T C C G T A A C G T A C G T A C G T A C G T
A C G T C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Nrf2(bZIP)/Lymphoblast-Nrf2-ChIP-Seq(GSE37589)/Homer

Match Rank:10
Score:0.57
Offset:-3
Orientation:reverse strand
Alignment:---ACGCAGCATGGCA
ATGACTCAGCAD----
 A C G T A C G T A C G T C G T A A G T C A C T G A G T C C G T A A C T G A G T C C G T A A C G T A C T G A C T G A G T C C G T A
T C G A C G A T A C T G G C T A T A G C C G A T G T A C C G T A A C T G T G A C C G T A C A G T A C G T A C G T A C G T A C G T