Information for 7-GCGCAGCCGCYSA (Motif 6)

C T A G A T G C A C T G A G T C C G T A A C T G A G T C A G T C T A C G A G T C A G T C A T G C C G T A
Reverse Opposite:
A C G T T A C G T C A G A C T G A G T C A C T G A C T G A G T C A C G T A C T G A G T C A T C G A G T C
p-value:1e-12
log p-value:-2.838e+01
Information Content per bp:1.847
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.07%
Number of Background Sequences with motif13.6
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets52.7 +/- 18.4bp
Average Position of motif in Background53.9 +/- 28.5bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NRF1/MA0506.1/Jaspar

Match Rank:1
Score:0.73
Offset:-1
Orientation:reverse strand
Alignment:-GCGCAGCCGCYSA
TGCGCAGGCGC---
 A C G T C T A G A T G C A C T G A G T C C G T A A C T G A G T C A G T C T A C G A G T C A G T C A T G C C G T A
A G C T A C T G A T G C C T A G A G T C T G C A A C T G T A C G A G T C A C T G A G T C A C G T A C G T A C G T

NHLH1/MA0048.2/Jaspar

Match Rank:2
Score:0.70
Offset:1
Orientation:forward strand
Alignment:GCGCAGCCGCYSA
-CGCAGCTGCG--
 C T A G A T G C A C T G A G T C C G T A A C T G A G T C A G T C T A C G A G T C A G T C A T G C C G T A
A C G T T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T

NRF1(NRF)/MCF7-NRF1-ChIP-Seq(Unpublished)/Homer

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCGCAGCCGCYSA
CTGCGCATGCGC---
 A C G T A C G T C T A G A T G C A C T G A G T C C G T A A C T G A G T C A G T C T A C G A G T C A G T C A T G C C G T A
A T G C A G C T T C A G T G A C T C A G A T G C T G C A A C G T A T C G G A T C A C T G A G T C A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---GCGCAGCCGCYSA-
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T C T A G A T G C A C T G A G T C C G T A A C T G A G T C A G T C T A C G A G T C A G T C A T G C C G T A A C G T
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

NRF(NRF)/Promoter/Homer

Match Rank:5
Score:0.63
Offset:-2
Orientation:forward strand
Alignment:--GCGCAGCCGCYSA
GTGCGCATGCGC---
 A C G T A C G T C T A G A T G C A C T G A G T C C G T A A C T G A G T C A G T C T A C G A G T C A G T C A T G C C G T A
A T C G A G C T A C T G A G T C A C T G A G T C C G T A A C G T A C T G A G T C A C T G A G T C A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:GCGCAGCCGCYSA
--NCAGCTGCTG-
 C T A G A T G C A C T G A G T C C G T A A C T G A G T C A G T C T A C G A G T C A G T C A T G C C G T A
A C G T A C G T T C G A A G T C C G T A A T C G A T G C C G A T A C T G A G T C A G C T A C T G A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:7
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCGCAGCCGCYSA
-AGCAGCTGCT--
 C T A G A T G C A C T G A G T C C G T A A C T G A G T C A G T C T A C G A G T C A G T C A T G C C G T A
A C G T C T G A T C A G T G A C C G T A A C T G T A G C C G A T C A T G A G T C A G C T A C G T A C G T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:forward strand
Alignment:GCGCAGCCGCYSA
-AGCAGCTGCTNN
 C T A G A T G C A C T G A G T C C G T A A C T G A G T C A G T C T A C G A G T C A G T C A T G C C G T A
A C G T C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:GCGCAGCCGCYSA
NNGCAGCTGTC--
 C T A G A T G C A C T G A G T C C G T A A C T G A G T C A G T C T A C G A G T C A G T C A T G C C G T A
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T

POL010.1_DCE_S_III/Jaspar

Match Rank:10
Score:0.60
Offset:3
Orientation:forward strand
Alignment:GCGCAGCCGCYSA
---CAGCC-----
 C T A G A T G C A C T G A G T C C G T A A C T G A G T C A G T C T A C G A G T C A G T C A T G C C G T A
A C G T A C G T A C G T T A G C C G T A A C T G A G T C A T G C A C G T A C G T A C G T A C G T A C G T