Information for 16-CCGCGCGGATTGG (Motif 14)

A G T C G A T C A C T G A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C T G A C T G
Reverse Opposite:
A G T C A G T C C G T A C G T A A C G T A G T C G T A C A C T G A G T C A C T G A G T C C A T G A C T G
p-value:1e-8
log p-value:-2.068e+01
Information Content per bp:1.928
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.54%
Number of Background Sequences with motif2.8
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets33.8 +/- 27.1bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-2.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFYA/MA0060.2/Jaspar

Match Rank:1
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-CCGCGCGGATTGG----
AGAGTGCTGATTGGTCCA
 A C G T A G T C G A T C A C T G A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.68
Offset:5
Orientation:reverse strand
Alignment:CCGCGCGGATTGG-------
-----CTGATTGGTCNATTT
 A G T C G A T C A C T G A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

NFY(CCAAT)/Promoter/Homer

Match Rank:3
Score:0.67
Offset:5
Orientation:reverse strand
Alignment:CCGCGCGGATTGG--
-----CCGATTGGCT
 A G T C G A T C A C T G A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C T G A C T G A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T

Gfi1b(Zf)/HPC7-Gfi1b-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.62
Offset:2
Orientation:reverse strand
Alignment:CCGCGCGGATTGG
--GCAGTGATTT-
 A G T C G A T C A C T G A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C T G A C T G
A C G T A C G T C T A G A G T C G C T A A T C G C G A T A C T G T C G A A C G T A C G T A C G T A C G T

Gfi1/MA0038.1/Jaspar

Match Rank:5
Score:0.60
Offset:3
Orientation:reverse strand
Alignment:CCGCGCGGATTGG
---CNGTGATTTN
 A G T C G A T C A C T G A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C T G A C T G
A C G T A C G T A C G T A T G C C G T A A T C G C G A T A C T G G C T A A C G T A C G T A C G T C T A G

Dux/MA0611.1/Jaspar

Match Rank:6
Score:0.59
Offset:5
Orientation:reverse strand
Alignment:CCGCGCGGATTGG
-----TTGATTGN
 A G T C G A T C A C T G A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C T G A C T G
A C G T A C G T A C G T A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G

POL004.1_CCAAT-box/Jaspar

Match Rank:7
Score:0.59
Offset:6
Orientation:reverse strand
Alignment:CCGCGCGGATTGG-----
------TGATTGGCTANN
 A G T C G A T C A C T G A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

PH0098.1_Lhx8/Jaspar

Match Rank:8
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:CCGCGCGGATTGG----
CACCGCTAATTAGNNGN
 A G T C G A T C A C T G A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
G A T C T G C A G T A C G T A C T C A G T G A C G A C T T C G A C T G A A G C T A G C T C T G A A C T G A C T G A C T G A C T G C G A T

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.57
Offset:1
Orientation:forward strand
Alignment:CCGCGCGGATTGG
-NNTGTGGATTSS
 A G T C G A T C A C T G A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C T G A C T G
A C G T C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

PH0026.1_Duxbl/Jaspar

Match Rank:10
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CCGCGCGGATTGG----
NNNNGTTGATTGGGTCG
 A G T C G A T C A C T G A G T C A C T G A G T C A C T G A C T G C G T A A C G T A C G T A C T G A C T G A C G T A C G T A C G T A C G T
A T G C C G T A A G T C A G T C T C A G G A C T C G A T C T A G C T G A A C G T A C G T C T A G T C A G T C A G G A C T G A T C T C A G