p-value: | 1e-11 |
log p-value: | -2.563e+01 |
Information Content per bp: | 1.840 |
Number of Target Sequences with motif | 18.0 |
Percentage of Target Sequences with motif | 1.93% |
Number of Background Sequences with motif | 97.6 |
Percentage of Background Sequences with motif | 0.22% |
Average Position of motif in Targets | 43.3 +/- 26.4bp |
Average Position of motif in Background | 49.3 +/- 38.6bp |
Strand Bias (log2 ratio + to - strand density) | -0.3 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
POL004.1_CCAAT-box/Jaspar
Match Rank: | 1 |
Score: | 0.78 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGGATTGGCT--- -TGATTGGCTANN |
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NFY(CCAAT)/Promoter/Homer
Match Rank: | 2 |
Score: | 0.77 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGGATTGGCT CCGATTGGCT |
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PH0139.1_Pitx3/Jaspar
Match Rank: | 3 |
Score: | 0.73 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GGGATTGGCT--- AGGGGGATTAGCTGCC |
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NFYB/MA0502.1/Jaspar
Match Rank: | 4 |
Score: | 0.70 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GGGATTGGCT----- CTGATTGGTCNATTT |
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NFIC/MA0161.1/Jaspar
Match Rank: | 5 |
Score: | 0.69 |
Offset: | 4 |
Orientation: | forward strand |
Alignment: | GGGATTGGCT ----TTGGCA |
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NFIX/MA0671.1/Jaspar
Match Rank: | 6 |
Score: | 0.68 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GGGATTGGCT-- ---NTTGGCANN |
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Gfi1/MA0038.1/Jaspar
Match Rank: | 7 |
Score: | 0.66 |
Offset: | -2 |
Orientation: | reverse strand |
Alignment: | --GGGATTGGCT CNGTGATTTN-- |
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PH0123.1_Obox3/Jaspar
Match Rank: | 8 |
Score: | 0.65 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GGGATTGGCT-- TGAGGGGGATTAACTAT |
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CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer
Match Rank: | 9 |
Score: | 0.65 |
Offset: | 1 |
Orientation: | reverse strand |
Alignment: | GGGATTGGCT -GGATTAGC- |
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PH0015.1_Crx/Jaspar
Match Rank: | 10 |
Score: | 0.64 |
Offset: | -5 |
Orientation: | forward strand |
Alignment: | -----GGGATTGGCT- CGTTGGGGATTAGCCT |
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