p-value: | 1e-7 |
log p-value: | -1.692e+01 |
Information Content per bp: | 1.530 |
Number of Target Sequences with motif | 4.0 |
Percentage of Target Sequences with motif | 0.51% |
Number of Background Sequences with motif | 2.5 |
Percentage of Background Sequences with motif | 0.01% |
Average Position of motif in Targets | 58.2 +/- 28.6bp |
Average Position of motif in Background | 26.3 +/- 2.1bp |
Strand Bias (log2 ratio + to - strand density) | 10.0 |
Multiplicity (# of sites on avg that occur together) | 1.00 |
Motif File: | file (matrix) reverse opposite |
SVG Files for Logos: | forward logo reverse opposite |
Sox2/MA0143.3/Jaspar
Match Rank: | 1 |
Score: | 0.67 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GTAACACAGG --AACAAAGG |
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POL009.1_DCE_S_II/Jaspar
Match Rank: | 2 |
Score: | 0.66 |
Offset: | 4 |
Orientation: | reverse strand |
Alignment: | GTAACACAGG ----CACAGN |
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PB0119.1_Foxa2_2/Jaspar
Match Rank: | 3 |
Score: | 0.64 |
Offset: | -4 |
Orientation: | forward strand |
Alignment: | ----GTAACACAGG- AAAAATAACAAACGG |
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Sox4(HMG)/proB-Sox4-ChIP-Seq(GSE50066)/Homer
Match Rank: | 4 |
Score: | 0.63 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTAACACAGG GGAACAAAGR |
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PB0071.1_Sox4_1/Jaspar
Match Rank: | 5 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTAACACAGG---- AGAAGAACAAAGGACTA |
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PB0061.1_Sox11_1/Jaspar
Match Rank: | 6 |
Score: | 0.63 |
Offset: | -3 |
Orientation: | forward strand |
Alignment: | ---GTAACACAGG---- ATAAGAACAAAGGACTA |
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Sox3/MA0514.1/Jaspar
Match Rank: | 7 |
Score: | 0.62 |
Offset: | 0 |
Orientation: | reverse strand |
Alignment: | GTAACACAGG AAAACAAAGG |
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PB0159.1_Rfx4_2/Jaspar
Match Rank: | 8 |
Score: | 0.61 |
Offset: | -3 |
Orientation: | reverse strand |
Alignment: | ---GTAACACAGG-- NNNGTAACTANGNNA |
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SOX10/MA0442.1/Jaspar
Match Rank: | 9 |
Score: | 0.60 |
Offset: | 3 |
Orientation: | reverse strand |
Alignment: | GTAACACAGG ---ACAAAG- |
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Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer
Match Rank: | 10 |
Score: | 0.60 |
Offset: | 2 |
Orientation: | reverse strand |
Alignment: | GTAACACAGG --RACAAWGG |
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