Information for 18-TGCTGCTGCCGCC (Motif 26)

G C A T A C T G A G T C A G C T A C T G A G T C A G C T A C T G A G T C A G T C A C T G A G T C A T G C
Reverse Opposite:
T A C G T A C G A G T C C T A G A C T G G T A C C T G A A C T G A G T C C T G A A C T G A G T C C G T A
p-value:1e-7
log p-value:-1.778e+01
Information Content per bp:1.827
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.28%
Number of Background Sequences with motif51.5
Percentage of Background Sequences with motif0.11%
Average Position of motif in Targets49.7 +/- 17.3bp
Average Position of motif in Background47.8 +/- 25.2bp
Strand Bias (log2 ratio + to - strand density)1.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PRDM9(Zf)/Testis-DMC1-ChIP-Seq(GSE35498)/Homer

Match Rank:1
Score:0.76
Offset:0
Orientation:reverse strand
Alignment:TGCTGCTGCCGCC--
AGATGCTRCTRCCHT
 G C A T A C T G A G T C A G C T A C T G A G T C A G C T A C T G A G T C A G T C A C T G A G T C A T G C A C G T A C G T
C G T A T C A G T G C A C G A T C T A G T G A C G A C T C T A G A G T C G A C T C T A G A G T C G A T C G C T A G A C T

MyoD(bHLH)/Myotube-MyoD-ChIP-Seq(GSE21614)/Homer

Match Rank:2
Score:0.69
Offset:0
Orientation:forward strand
Alignment:TGCTGCTGCCGCC
AGCAGCTGCTNN-
 G C A T A C T G A G T C A G C T A C T G A G T C A G C T A C T G A G T C A G T C A C T G A G T C A T G C
C T G A T C A G A G T C C G T A A T C G A T G C C G A T A C T G A G T C G A C T A T C G A G T C A C G T

Ascl2/MA0816.1/Jaspar

Match Rank:3
Score:0.68
Offset:0
Orientation:forward strand
Alignment:TGCTGCTGCCGCC
AGCAGCTGCT---
 G C A T A C T G A G T C A G C T A C T G A G T C A G C T A C T G A G T C A G T C A C T G A G T C A T G C
T C G A T C A G G T A C C G T A A T C G T G A C C G A T A C T G A G T C G A C T A C G T A C G T A C G T

PB0003.1_Ascl2_1/Jaspar

Match Rank:4
Score:0.67
Offset:-4
Orientation:reverse strand
Alignment:----TGCTGCTGCCGCC
NNNNAGCAGCTGCTGAN
 A C G T A C G T A C G T A C G T G C A T A C T G A G T C A G C T A C T G A G T C A G C T A C T G A G T C A G T C A C T G A G T C A T G C
G T A C C G T A C T A G A C G T T C G A T C A G A G T C C G T A A T C G T A G C C G A T A C T G A G T C A G C T T C A G T G C A T C A G

Myod1/MA0499.1/Jaspar

Match Rank:5
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCTGCTGCCGCC
TGCAGCTGTCCCT
 G C A T A C T G A G T C A G C T A C T G A G T C A G C T A C T G A G T C A G T C A C T G A G T C A T G C
G C A T T A C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C T A G C A G T C A G C T

NHLH1/MA0048.2/Jaspar

Match Rank:6
Score:0.65
Offset:0
Orientation:forward strand
Alignment:TGCTGCTGCCGCC
CGCAGCTGCG---
 G C A T A C T G A G T C A G C T A C T G A G T C A G C T A C T G A G T C A G T C A C T G A G T C A T G C
T G A C T C A G G T A C T G C A A T C G T A G C A C G T T A C G G A T C A C T G A C G T A C G T A C G T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-TGCTGCTGCCGCC
CAGCAGCTGN----
 A C G T G C A T A C T G A G T C A G C T A C T G A G T C A G C T A C T G A G T C A G T C A C T G A G T C A T G C
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T A C G T

SCL(bHLH)/HPC7-Scl-ChIP-Seq(GSE13511)/Homer

Match Rank:8
Score:0.64
Offset:0
Orientation:forward strand
Alignment:TGCTGCTGCCGCC
ANCAGCTG-----
 G C A T A C T G A G T C A G C T A C T G A G T C A G C T A C T G A G T C A G T C A C T G A G T C A T G C
C T G A T C A G G T A C G C T A A C T G T G A C G C A T C A T G A C G T A C G T A C G T A C G T A C G T

Myog/MA0500.1/Jaspar

Match Rank:9
Score:0.63
Offset:-1
Orientation:reverse strand
Alignment:-TGCTGCTGCCGCC
NNGCAGCTGTC---
 A C G T G C A T A C T G A G T C A G C T A C T G A G T C A G C T A C T G A G T C A G T C A C T G A G T C A T G C
A T G C G A C T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G T C A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:10
Score:0.62
Offset:-1
Orientation:reverse strand
Alignment:-TGCTGCTGCCGCC
NNGCAGCTGTT---
 A C G T G C A T A C T G A G T C A G C T A C T G A G T C A G C T A C T G A G T C A G T C A C T G A G T C A T G C
A T G C G C A T A T C G A G T C C G T A A T C G A G T C A C G T A C T G A G C T A G C T A C G T A C G T A C G T