Information for 1-SHTGTGGTTW (Motif 1)

A T G C G A C T A C G T A C T G A C G T A C T G A C T G A G C T G A C T C G T A
Reverse Opposite:
G C A T C T G A C T G A G T A C A G T C G T C A G T A C G T C A C T G A T A C G
p-value:1e-37
log p-value:-8.708e+01
Information Content per bp:1.670
Number of Target Sequences with motif107.0
Percentage of Target Sequences with motif13.74%
Number of Background Sequences with motif1435.4
Percentage of Background Sequences with motif3.00%
Average Position of motif in Targets52.2 +/- 23.6bp
Average Position of motif in Background50.8 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.9
Multiplicity (# of sites on avg that occur together)1.09
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:1
Score:0.97
Offset:-1
Orientation:reverse strand
Alignment:-SHTGTGGTTW-
NNHTGTGGTTWN
 A C G T A T G C G A C T A C G T A C T G A C G T A C T G A C T G A G C T G A C T C G T A A C G T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.95
Offset:-1
Orientation:forward strand
Alignment:-SHTGTGGTTW
GTCTGTGGTTT
 A C G T A T G C G A C T A C G T A C T G A C G T A C T G A C T G A G C T G A C T C G T A
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.95
Offset:1
Orientation:reverse strand
Alignment:SHTGTGGTTW-
-CTGTGGTTTN
 A T G C G A C T A C G T A C T G A C G T A C T G A C T G A G C T G A C T C G T A A C G T
A C G T G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:4
Score:0.94
Offset:0
Orientation:reverse strand
Alignment:SHTGTGGTTW
NNTGTGGTTT
 A T G C G A C T A C G T A C T G A C G T A C T G A C T G A G C T G A C T C G T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.94
Offset:0
Orientation:forward strand
Alignment:SHTGTGGTTW
GCTGTGGTTT
 A T G C G A C T A C G T A C T G A C G T A C T G A C T G A G C T G A C T C G T A
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.86
Offset:0
Orientation:reverse strand
Alignment:SHTGTGGTTW
TTTGCGGTTT
 A T G C G A C T A C G T A C T G A C G T A C T G A C T G A G C T G A C T C G T A
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:SHTGTGGTTW
-TTGCGGTTT
 A T G C G A C T A C G T A C T G A C G T A C T G A C T G A G C T G A C T C G T A
A C G T A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.74
Offset:3
Orientation:reverse strand
Alignment:SHTGTGGTTW
---GTGGAT-
 A T G C G A C T A C G T A C T G A C G T A C T G A C T G A G C T G A C T C G T A
A C G T A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T

GLI2/MA0734.1/Jaspar

Match Rank:9
Score:0.69
Offset:-1
Orientation:reverse strand
Alignment:-SHTGTGGTTW-
CAGTGTGGTCGC
 A C G T A T G C G A C T A C G T A C T G A C G T A C T G A C T G A G C T G A C T C G T A A C G T
G A T C G C T A C A T G A C G T A T C G C A G T T A C G C T A G A C G T G T A C A C T G G A T C

FOXH1/MA0479.1/Jaspar

Match Rank:10
Score:0.69
Offset:2
Orientation:reverse strand
Alignment:SHTGTGGTTW---
--TGTGGATTNNN
 A T G C G A C T A C G T A C T G A C G T A C T G A C T G A G C T G A C T C G T A A C G T A C G T A C G T
A C G T A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A