Information for 1-NRTCACGTGRYBNNNN (Motif 1)

T A C G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C A T G C A C T G T A G C A T C G T C A G
Reverse Opposite:
A G T C T A G C A T C G T G A C T A C G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C A T G C
p-value:1e-565
log p-value:-1.302e+03
Information Content per bp:1.538
Number of Target Sequences with motif531.0
Percentage of Target Sequences with motif62.62%
Number of Background Sequences with motif1272.1
Percentage of Background Sequences with motif3.07%
Average Position of motif in Targets51.3 +/- 16.1bp
Average Position of motif in Background48.5 +/- 40.4bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.13
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

USF1(bHLH)/GM12878-Usf1-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.97
Offset:0
Orientation:forward strand
Alignment:NRTCACGTGRYBNNNN
GGTCACGTGA------
 T A C G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C A T G C A C T G T A G C A T C G T C A G
T A C G T C A G A G C T A T G C C G T A A G T C T C A G A C G T A C T G T C G A A C G T A C G T A C G T A C G T A C G T A C G T

TFEB/MA0692.1/Jaspar

Match Rank:2
Score:0.97
Offset:1
Orientation:reverse strand
Alignment:NRTCACGTGRYBNNNN
-GTCACGTGAT-----
 T A C G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C A T G C A C T G T A G C A T C G T C A G
A C G T T C A G A C G T T G A C C G T A A G T C T C A G C A G T C A T G T C G A A G C T A C G T A C G T A C G T A C G T A C G T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.96
Offset:1
Orientation:forward strand
Alignment:NRTCACGTGRYBNNNN
-GNCACGTG-------
 T A C G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C A T G C A C T G T A G C A T C G T C A G
A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

Usf2(bHLH)/C2C12-Usf2-ChIP-Seq(GSE36030)/Homer

Match Rank:4
Score:0.96
Offset:1
Orientation:forward strand
Alignment:NRTCACGTGRYBNNNN
-GTCACGTGGT-----
 T A C G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C A T G C A C T G T A G C A T C G T C A G
A C G T T C A G A C G T A G T C T C G A A G T C T C A G G C A T C T A G C T A G A G C T A C G T A C G T A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:5
Score:0.96
Offset:1
Orientation:forward strand
Alignment:NRTCACGTGRYBNNNN
-GHCACGTG-------
 T A C G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C A T G C A C T G T A G C A T C G T C A G
A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

TFE3/MA0831.1/Jaspar

Match Rank:6
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:NRTCACGTGRYBNNNN
-GTCACGTGNT-----
 T A C G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C A T G C A C T G T A G C A T C G T C A G
A C G T C T A G A C G T T G A C C G T A A G T C T C A G C G A T A T C G T C G A A G C T A C G T A C G T A C G T A C G T A C G T

TFEC/MA0871.1/Jaspar

Match Rank:7
Score:0.96
Offset:1
Orientation:reverse strand
Alignment:NRTCACGTGRYBNNNN
-NTCACGTGAT-----
 T A C G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C A T G C A C T G T A G C A T C G T C A G
A C G T T C A G A C G T A G T C C G T A A G T C T C A G C G A T A C T G G T C A A G C T A C G T A C G T A C G T A C G T A C G T

MLXIPL/MA0664.1/Jaspar

Match Rank:8
Score:0.95
Offset:1
Orientation:forward strand
Alignment:NRTCACGTGRYBNNNN
-ATCACGTGAT-----
 T A C G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C A T G C A C T G T A G C A T C G T C A G
A C G T C T G A C A G T A T G C C G T A T A G C T C A G A C G T A C T G G C T A G A C T A C G T A C G T A C G T A C G T A C G T

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:9
Score:0.95
Offset:1
Orientation:forward strand
Alignment:NRTCACGTGRYBNNNN
-ACCACGTGGTNN---
 T A C G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C A T G C A C T G T A G C A T C G T C A G
A C G T T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T A C G T A C G T A C G T

bHLHE40(bHLH)/HepG2-BHLHE40-ChIP-Seq(GSE31477)/Homer

Match Rank:10
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:NRTCACGTGRYBNNNN
NGKCACGTGM------
 T A C G T C A G A G C T A G T C C G T A A G T C T C A G A C G T A C T G T C G A A G T C A T G C A C T G T A G C A T C G T C A G
T C G A T C A G C A T G A G T C C G T A A G T C C T A G A C G T A C T G G T A C A C G T A C G T A C G T A C G T A C G T A C G T