Information for 18-GGTCAGACCACGC (Motif 41)

A C T G A C T G A C G T A G T C C G T A A C T G C G T A T A G C A G T C C G T A A G T C A C T G A G T C
Reverse Opposite:
A C T G A G T C A C T G A C G T A C T G A C T G C G A T A G T C A C G T C T A G C G T A A G T C A G T C
p-value:1e-6
log p-value:-1.422e+01
Information Content per bp:1.933
Number of Target Sequences with motif3.0
Percentage of Target Sequences with motif0.41%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets38.8 +/- 27.3bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)2.0
Multiplicity (# of sites on avg that occur together)1.67
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Srebp2(bHLH)/HepG2-Srebp2-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.69
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGACCACGC
CNGTCACGCCAC--
 A C G T A C T G A C T G A C G T A G T C C G T A A C T G C G T A T A G C A G T C C G T A A G T C A C T G A G T C
G T A C C T A G T C A G A G C T T A G C C G T A A T G C T A C G A G T C G T A C G T C A A G T C A C G T A C G T

Ahr::Arnt/MA0006.1/Jaspar

Match Rank:2
Score:0.64
Offset:8
Orientation:reverse strand
Alignment:GGTCAGACCACGC-
--------CACGCA
 A C T G A C T G A C G T A G T C C G T A A C T G C G T A T A G C A G T C C G T A A G T C A C T G A G T C A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A G T A C C T A G G T A C C T G A

Klf12/MA0742.1/Jaspar

Match Rank:3
Score:0.63
Offset:5
Orientation:forward strand
Alignment:GGTCAGACCACGC-------
-----GACCACGCCCTTATT
 A C T G A C T G A C G T A G T C C G T A A C T G C G T A T A G C A G T C C G T A A G T C A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T C A T G T C G A G T A C T A G C T G C A G T A C C T A G A G T C A G T C A G T C G C A T G C A T G C T A G C A T G C A T

Srebp1a(bHLH)/HepG2-Srebp1a-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:GGTCAGACCACGC
-ATCACCCCAT--
 A C T G A C T G A C G T A G T C C G T A A C T G C G T A T A G C A G T C C G T A A G T C A C T G A G T C
A C G T T C G A G C A T A T G C C T G A A T G C T A G C A G T C G T A C T C G A A G C T A C G T A C G T

SREBF2/MA0596.1/Jaspar

Match Rank:5
Score:0.59
Offset:1
Orientation:reverse strand
Alignment:GGTCAGACCACGC
-ATCACCCCAT--
 A C T G A C T G A C G T A G T C C G T A A C T G C G T A T A G C A G T C C G T A A G T C A C T G A G T C
A C G T C T G A A C G T A G T C C G T A A T G C T A G C A G T C A T G C C G T A A G C T A C G T A C G T

MF0004.1_Nuclear_Receptor_class/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGTCAGACCACGC
AGGTCA--------
 A C G T A C T G A C T G A C G T A G T C C G T A A C T G C G T A T A G C A G T C C G T A A G T C A C T G A G T C
C T G A C A T G C A T G C G A T G T A C T G C A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

GLI3(Zf)/Limb-GLI3-ChIP-Chip(GSE11077)/Homer

Match Rank:7
Score:0.58
Offset:4
Orientation:reverse strand
Alignment:GGTCAGACCACGC---
----GGACCACCCACG
 A C T G A C T G A C G T A G T C C G T A A C T G C G T A T A G C A G T C C G T A A G T C A C T G A G T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C T A G A T C G T C G A G T A C A G T C G C T A A T G C G T A C G A T C C G T A T A G C T C A G

GLI2/MA0734.1/Jaspar

Match Rank:8
Score:0.58
Offset:3
Orientation:forward strand
Alignment:GGTCAGACCACGC--
---GCGACCACACTG
 A C T G A C T G A C G T A G T C C G T A A C T G C G T A T A G C A G T C C G T A A G T C A C T G A G T C A C G T A C G T
A C G T A C G T A C G T C T A G T G A C C A T G T G C A A G T C A T G C G T C A A T G C T G C A G T A C C G A T C T A G

COUP-TFII(NR)/Artia-Nr2f2-ChIP-Seq(GSE46497)/Homer

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---GGTCAGACCACGC
AGRGGTCA--------
 A C G T A C G T A C G T A C T G A C T G A C G T A G T C C G T A A C T G C G T A T A G C A G T C C G T A A G T C A C T G A G T C
T C G A T C A G T C G A A C T G C A T G A C G T A G T C C T G A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:10
Score:0.57
Offset:3
Orientation:forward strand
Alignment:GGTCAGACCACGC-
---ACGCCCACGCA
 A C T G A C T G A C G T A G T C C G T A A C T G C G T A T A G C A G T C C G T A A G T C A C T G A G T C A C G T
A C G T A C G T A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A