Information for 20-TTAGATGCGG (Motif 39)

A G C T A C G T C G T A A C T G C G T A A G C T A C T G A G T C A C T G A C T G
Reverse Opposite:
A G T C A G T C A C T G G T A C C T G A C G A T A G T C A C G T C G T A C T G A
p-value:1e-6
log p-value:-1.520e+01
Information Content per bp:1.862
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif8.6
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets40.7 +/- 20.2bp
Average Position of motif in Background62.8 +/- 20.8bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.40
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0035.1_Irf5_1/Jaspar

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TTAGATGCGG-----
NTGGTTTCGGTTNNN
 A G C T A C G T C G T A A C T G C G T A A G C T A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T
A G C T G A C T C T A G A C T G A C G T G C A T A G C T A G T C C T A G C T A G G A C T G C A T G A C T G C T A C G A T

PB0036.1_Irf6_1/Jaspar

Match Rank:2
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---TTAGATGCGG----
NNNTTGGTTTCGNTNNN
 A C G T A C G T A C G T A G C T A C G T C G T A A C T G C G T A A G C T A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T
G C T A G T A C G C A T A C G T A G C T C T A G A C T G A C G T G C A T A C G T A G T C C T A G C T G A G A C T G A T C G C T A C A T G

PAX3:FKHR-fusion(Paired,Homeobox)/Rh4-PAX3:FKHR-ChIP-Seq(GSE19063)/Homer

Match Rank:3
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----TTAGATGCGG-
NNAATTAGTCACGGT
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A A C T G C G T A A G C T A C T G A G T C A C T G A C T G A C G T
A G C T G A T C T C G A C G T A A C G T A G C T C G T A A C T G G A C T G A T C G T C A G A T C C T A G A T C G G C A T

PB0024.1_Gcm1_1/Jaspar

Match Rank:4
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:TTAGATGCGG------
NNNNATGCGGGTNNNN
 A G C T A C G T C G T A A C T G C G T A A G C T A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T A C G T
G T C A C T G A G C A T A C T G T C G A G A C T T C A G A T G C C A T G A C T G A C T G A G C T C G T A A G T C A C T G C G T A

GCM2/MA0767.1/Jaspar

Match Rank:5
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TTAGATGCGG---
---TATGCGGGTA
 A G C T A C G T C G T A A C T G C G T A A G C T A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C G A A G C T T C A G A T G C C A T G A C T G C T A G G A C T C T G A

PB0160.1_Rfxdc2_2/Jaspar

Match Rank:6
Score:0.58
Offset:-4
Orientation:forward strand
Alignment:----TTAGATGCGG---
CTACTTGGATACGGAAT
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A A C T G C G T A A G C T A C T G A G T C A C T G A C T G A C G T A C G T A C G T
A T G C A C G T T C G A A T G C C A G T G A C T T C A G A C T G C G T A A C G T C G T A G A T C T A C G T A C G C G T A C G T A G C A T

SPDEF/MA0686.1/Jaspar

Match Rank:7
Score:0.58
Offset:1
Orientation:reverse strand
Alignment:TTAGATGCGG--
-TACATCCGGGT
 A G C T A C G T C G T A A C T G C G T A A G C T A C T G A G T C A C T G A C T G A C G T A C G T
A C G T G A C T C T G A A G T C C G T A G A C T G T A C A G T C A C T G A T C G A C T G G C A T

PB0037.1_Isgf3g_1/Jaspar

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:TTAGATGCGG-----
TNAGTTTCGATTTTN
 A G C T A C G T C G T A A C T G C G T A A G C T A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T A C G T
C A G T G C A T C T G A A T C G C G A T G C A T A C G T A G T C C T A G C G T A C G A T G C A T G A C T G A C T A C T G

PB0034.1_Irf4_1/Jaspar

Match Rank:9
Score:0.56
Offset:-1
Orientation:reverse strand
Alignment:-TTAGATGCGG----
TNTGGTTTCGATACN
 A C G T A G C T A C G T C G T A A C T G C G T A A G C T A C T G A G T C A C T G A C T G A C G T A C G T A C G T A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

CENPB/MA0637.1/Jaspar

Match Rank:10
Score:0.54
Offset:-4
Orientation:reverse strand
Alignment:----TTAGATGCGG-
TTCGTNNNANGCGGG
 A C G T A C G T A C G T A C G T A G C T A C G T C G T A A C T G C G T A A G C T A C T G A G T C A C T G A C T G A C G T
C A G T C G A T A G T C C A T G A G C T C G A T A T C G A C G T C T G A G C A T T C A G T G A C C T A G C T A G C T A G