Information for 5-CGGCTGCAAA (Motif 8)

T A G C C T A G A T C G T G A C G A C T T A C G A T G C C T G A T C G A G T C A
Reverse Opposite:
C A G T A G C T G A C T A T C G A T G C C T G A A C T G A T G C G A T C A T C G
p-value:1e-10
log p-value:-2.433e+01
Information Content per bp:1.692
Number of Target Sequences with motif46.0
Percentage of Target Sequences with motif4.99%
Number of Background Sequences with motif713.9
Percentage of Background Sequences with motif1.59%
Average Position of motif in Targets55.6 +/- 24.4bp
Average Position of motif in Background50.6 +/- 32.9bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:1
Score:0.67
Offset:0
Orientation:forward strand
Alignment:CGGCTGCAAA
CGGTTTCAAA
 T A G C C T A G A T C G T G A C G A C T T A C G A T G C C T G A T C G A G T C A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A

MTF1/MA0863.1/Jaspar

Match Rank:2
Score:0.61
Offset:-4
Orientation:reverse strand
Alignment:----CGGCTGCAAA
GTGCCGTGTGCAAA
 A C G T A C G T A C G T A C G T T A G C C T A G A T C G T G A C G A C T T A C G A T G C C T G A T C G A G T C A
C T A G A C G T C T A G G T A C G A T C A C T G A C G T A C T G G A C T A C T G A G T C C G T A T G C A G T C A

POL010.1_DCE_S_III/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:CGGCTGCAAA
-NGCTN----
 T A G C C T A G A T C G T G A C G A C T T A C G A T G C C T G A T C G A G T C A
A C G T T A C G A C T G A G T C A C G T A T C G A C G T A C G T A C G T A C G T

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:4
Score:0.60
Offset:1
Orientation:forward strand
Alignment:CGGCTGCAAA-
-GGCGGGAAAH
 T A G C C T A G A T C G T G A C G A C T T A C G A T G C C T G A T C G A G T C A A C G T
A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

PB0044.1_Mtf1_1/Jaspar

Match Rank:5
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----CGGCTGCAAA--
GGGCCGTGTGCAAAAA
 A C G T A C G T A C G T A C G T T A G C C T A G A T C G T G A C G A C T T A C G A T G C C T G A T C G A G T C A A C G T A C G T
C A T G A C T G C T A G G A T C G T A C C A T G C A G T A C T G G A C T C A T G G T A C C G T A T G C A G T C A C T G A G C A T

Tcf12(bHLH)/GM12878-Tcf12-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.60
Offset:-3
Orientation:reverse strand
Alignment:---CGGCTGCAAA
CAGCAGCTGN---
 A C G T A C G T A C G T T A G C C T A G A T C G T G A C G A C T T A C G A T G C C T G A T C G A G T C A
T G A C T C G A T C A G A G T C C G T A A T C G A T G C A C G T A C T G A G C T A C G T A C G T A C G T

Tcf12/MA0521.1/Jaspar

Match Rank:7
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGGCTGCAAA
AACAGCTGCAG-
 A C G T A C G T T A G C C T A G A T C G T G A C G A C T T A C G A T G C C T G A T C G A G T C A
T C G A T C G A A G T C C G T A C T A G T A G C A C G T A C T G T A G C C G T A T A C G A C G T

Myog/MA0500.1/Jaspar

Match Rank:8
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--CGGCTGCAAA
GACAGCTGCAG-
 A C G T A C G T T A G C C T A G A T C G T G A C G A C T T A C G A T G C C T G A T C G A G T C A
T C A G T C G A A G T C C G T A A C T G T A G C A C G T A C T G T A G C C T G A T A C G A C G T

CEBP:AP1(bZIP)/ThioMac-CEBPb-ChIP-Seq(GSE21512)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-CGGCTGCAAA
NATGTTGCAA-
 A C G T T A G C C T A G A T C G T G A C G A C T T A C G A T G C C T G A T C G A G T C A
C T A G T C G A C G A T C T A G G C A T C A G T C T A G G A T C C G T A G T C A A C G T

Myod1/MA0499.1/Jaspar

Match Rank:10
Score:0.59
Offset:-5
Orientation:reverse strand
Alignment:-----CGGCTGCAAA
NGNGACAGCTGCN--
 A C G T A C G T A C G T A C G T A C G T T A G C C T A G A T C G T G A C G A C T T A C G A T G C C T G A T C G A G T C A
T C G A T C A G A T C G T C A G T C G A A G T C C G T A A C T G T A G C C G A T A C T G A T G C C G T A A C G T A C G T