Information for 15-AGCACAAAAGTGG (Motif 24)

G C T A T C A G T A G C G C T A T G A C G C T A C T G A T C G A C G T A T A C G G A C T C A T G T C A G
Reverse Opposite:
A G T C G T A C C T G A A G T C G C A T A G C T G A C T C G A T A C T G C G A T A T C G A G T C C G A T
p-value:1e-8
log p-value:-1.964e+01
Information Content per bp:1.632
Number of Target Sequences with motif32.0
Percentage of Target Sequences with motif3.67%
Number of Background Sequences with motif493.9
Percentage of Background Sequences with motif1.06%
Average Position of motif in Targets52.6 +/- 25.4bp
Average Position of motif in Background49.2 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0208.1_Zscan4_2/Jaspar

Match Rank:1
Score:0.67
Offset:-3
Orientation:forward strand
Alignment:---AGCACAAAAGTGG
CGAAGCACACAAAATA
 A C G T A C G T A C G T G C T A T C A G T A G C G C T A T G A C G C T A C T G A T C G A C G T A T A C G G A C T C A T G T C A G
G T A C T A C G G C T A T C G A C T A G T G A C C G T A G T A C C T G A G A T C G C T A G T C A G T C A G C T A G C A T T C G A

Sox3/MA0514.1/Jaspar

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:AGCACAAAAGTGG
AAAACAAAGG---
 G C T A T C A G T A G C G C T A T G A C G C T A C T G A T C G A C G T A T A C G G A C T C A T G T C A G
T C G A T C G A T C G A C G T A A T G C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox3(HMG)/NPC-Sox3-ChIP-Seq(GSE33059)/Homer

Match Rank:3
Score:0.61
Offset:2
Orientation:reverse strand
Alignment:AGCACAAAAGTGG
--RACAAWGG---
 G C T A T C A G T A G C G C T A T G A C G C T A C T G A T C G A C G T A T A C G G A C T C A T G T C A G
A C G T A C G T T C G A G T C A T G A C C G T A C G T A C G T A C T A G T A C G A C G T A C G T A C G T

Sox6(HMG)/Myotubes-Sox6-ChIP-Seq(GSE32627)/Homer

Match Rank:4
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AGCACAAAAGTGG
RNAACAATGG---
 G C T A T C A G T A G C G C T A T G A C G C T A C T G A T C G A C G T A T A C G G A C T C A T G T C A G
T C G A T C A G T C G A T C G A A T G C C G T A T C G A G C A T C A T G T A C G A C G T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:5
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AGCACAAAAGTGG
CTCACACAATGGCGC
 A C G T A C G T G C T A T C A G T A G C G C T A T G A C G C T A C T G A T C G A C G T A T A C G G A C T C A T G T C A G
A G T C A C G T A G T C T C G A T A G C C G T A A T G C G T C A G T C A G C A T C T A G T C A G G T A C A C T G A T G C

Sox15(HMG)/CPA-Sox15-ChIP-Seq(GSE62909)/Homer

Match Rank:6
Score:0.58
Offset:1
Orientation:forward strand
Alignment:AGCACAAAAGTGG
-RAACAATGGN--
 G C T A T C A G T A G C G C T A T G A C G C T A C T G A T C G A C G T A T A C G G A C T C A T G T C A G
A C G T C T G A T C G A C G T A A T G C C G T A C G T A C G A T C T A G T C A G G A T C A C G T A C G T

PB0145.1_Mafb_2/Jaspar

Match Rank:7
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----AGCACAAAAGTGG
CAATTGCAAAAATAT--
 A C G T A C G T A C G T A C G T G C T A T C A G T A G C G C T A T G A C G C T A C T G A T C G A C G T A T A C G G A C T C A T G T C A G
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T A C G T A C G T

Sox10(HMG)/SciaticNerve-Sox3-ChIP-Seq(GSE35132)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:AGCACAAAAGTGG
VRRACAAWGG---
 G C T A T C A G T A G C G C T A T G A C G C T A C T G A T C G A C G T A T A C G G A C T C A T G T C A G
T A G C C T A G T C G A C G T A A G T C C G T A C T G A C G T A C T A G T A C G A C G T A C G T A C G T

PB0121.1_Foxj3_2/Jaspar

Match Rank:9
Score:0.57
Offset:-3
Orientation:forward strand
Alignment:---AGCACAAAAGTGG-
AACACCAAAACAAAGGA
 A C G T A C G T A C G T G C T A T C A G T A G C G C T A T G A C G C T A C T G A T C G A C G T A T A C G G A C T C A T G T C A G A C G T
G T C A C G T A A G T C C T G A G A T C G A T C T G C A G C T A G T C A C G T A A G T C C G T A C G T A G C T A C A T G T A C G C G T A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.56
Offset:-3
Orientation:forward strand
Alignment:---AGCACAAAAGTGG
NWAACCACADNN----
 A C G T A C G T A C G T G C T A T C A G T A G C G C T A T G A C G C T A C T G A T C G A C G T A T A C G G A C T C A T G T C A G
T G A C G C T A T C G A T G C A A G T C A G T C C G T A A G T C C G T A C T G A G C T A G T A C A C G T A C G T A C G T A C G T