Information for 12-GTGGTTGACA (Motif 17)

C A T G A C G T A C T G A C T G A G C T A C G T T C A G C T G A T A G C G C T A
Reverse Opposite:
C A G T A T C G A G C T A G T C G T C A C T G A G T A C A G T C C G T A G T A C
p-value:1e-10
log p-value:-2.366e+01
Information Content per bp:1.835
Number of Target Sequences with motif14.0
Percentage of Target Sequences with motif1.61%
Number of Background Sequences with motif65.8
Percentage of Background Sequences with motif0.14%
Average Position of motif in Targets53.7 +/- 26.8bp
Average Position of motif in Background53.6 +/- 27.8bp
Strand Bias (log2 ratio + to - strand density)-0.2
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Pknox1(Homeobox)/ES-Prep1-ChIP-Seq(GSE63282)/Homer

Match Rank:1
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTGGTTGACA--
BTGABTGACAGS
 C A T G A C G T A C T G A C T G A G C T A C G T T C A G C T G A T A G C G C T A A C G T A C G T
A C G T C G A T A C T G C G T A A C G T A C G T A C T G C T G A A G T C C T G A T A C G A T G C

Pbx3(Homeobox)/GM12878-PBX3-ChIP-Seq(GSE32465)/Homer

Match Rank:2
Score:0.73
Offset:0
Orientation:reverse strand
Alignment:GTGGTTGACA--
NTGATTGACAGN
 C A T G A C G T A C T G A C T G A G C T A C G T T C A G C T G A T A G C G C T A A C G T A C G T
A C G T C G A T A T C G C G T A A C G T C A G T A C T G C T G A A G T C C T G A A T C G A T C G

MEIS3/MA0775.1/Jaspar

Match Rank:3
Score:0.71
Offset:4
Orientation:forward strand
Alignment:GTGGTTGACA--
----TTGACAGG
 C A T G A C G T A C T G A C T G A G C T A C G T T C A G C T G A T A G C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T G C A T A T C G C T G A G A T C C T G A A C T G A T C G

MEIS1/MA0498.2/Jaspar

Match Rank:4
Score:0.70
Offset:4
Orientation:forward strand
Alignment:GTGGTTGACA-
----TTGACAG
 C A T G A C G T A C T G A C T G A G C T A C G T T C A G C T G A T A G C G C T A A C G T
A C G T A C G T A C G T A C G T G C A T G C A T A T C G T G C A A G T C C T G A C T A G

MEIS2/MA0774.1/Jaspar

Match Rank:5
Score:0.69
Offset:4
Orientation:forward strand
Alignment:GTGGTTGACA--
----TTGACAGC
 C A T G A C G T A C T G A C T G A G C T A C G T T C A G C T G A T A G C G C T A A C G T A C G T
A C G T A C G T A C G T A C G T C G A T C A G T A C T G C G T A G T A C T G C A T A C G T A G C

PBX1(Homeobox)/MCF7-PBX1-ChIP-Seq(GSE28007)/Homer

Match Rank:6
Score:0.69
Offset:1
Orientation:reverse strand
Alignment:GTGGTTGACA---
-TGAGTGACAGSC
 C A T G A C G T A C T G A C T G A G C T A C G T T C A G C T G A T A G C G C T A A C G T A C G T A C G T
A C G T C G A T A T C G T C G A A C T G C G A T A T C G C T G A A G T C C G T A A T C G T A C G G A T C

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:7
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GTGGTTGACA
NNTGTGGTTT---
 A C G T A C G T A C G T C A T G A C G T A C T G A C T G A G C T A C G T T C A G C T G A T A G C G C T A
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T A C G T

PB0029.1_Hic1_1/Jaspar

Match Rank:8
Score:0.66
Offset:-2
Orientation:reverse strand
Alignment:--GTGGTTGACA----
NGTAGGTTGGCATNNN
 A C G T A C G T C A T G A C G T A C T G A C T G A G C T A C G T T C A G C T G A T A G C G C T A A C G T A C G T A C G T A C G T
C T A G C T A G A G C T C G T A T C A G T C A G A C G T C A G T A C T G A T C G A G T C C G T A G A C T T G C A T C A G G C A T

Tgif1(Homeobox)/mES-Tgif1-ChIP-Seq(GSE55404)/Homer

Match Rank:9
Score:0.65
Offset:3
Orientation:reverse strand
Alignment:GTGGTTGACA-
---RHTGWCAR
 C A T G A C G T A C T G A C T G A G C T A C G T T C A G C T G A T A G C G C T A A C G T
A C G T A C G T A C G T C T A G G T A C A G C T C T A G G C T A G A T C C G T A C T G A

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:10
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GTGGTTGACA
NNHTGTGGTTWN--
 A C G T A C G T A C G T A C G T C A T G A C G T A C T G A C T G A G C T A C G T T C A G C T G A T A G C G C T A
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T A C G T