Information for 5-TGTGGTTTTT (Motif 4)

C G A T A T C G C A G T A C T G A T C G G A C T A C G T C A G T G A C T G A C T
Reverse Opposite:
C T G A C T G A G T C A C G T A C T G A A T G C A G T C G T C A A T G C G C T A
p-value:1e-15
log p-value:-3.673e+01
Information Content per bp:1.766
Number of Target Sequences with motif52.0
Percentage of Target Sequences with motif5.80%
Number of Background Sequences with motif696.4
Percentage of Background Sequences with motif1.45%
Average Position of motif in Targets52.3 +/- 29.3bp
Average Position of motif in Background52.0 +/- 29.4bp
Strand Bias (log2 ratio + to - strand density)0.8
Multiplicity (# of sites on avg that occur together)1.04
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.91
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTTT
NNTGTGGTTT--
 A C G T A C G T C G A T A T C G C A G T A C T G A T C G G A C T A C G T C A G T G A C T G A C T
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:2
Score:0.88
Offset:-3
Orientation:forward strand
Alignment:---TGTGGTTTTT
GTCTGTGGTTT--
 A C G T A C G T A C G T C G A T A T C G C A G T A C T G A T C G G A C T A C G T C A G T G A C T G A C T
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:3
Score:0.87
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTTT
CTGTGGTTTN-
 A C G T C G A T A T C G C A G T A C T G A T C G G A C T A C G T C A G T G A C T G A C T
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.86
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTTTTT
GCTGTGGTTT--
 A C G T A C G T C G A T A T C G C A G T A C T G A T C G G A C T A C G T C A G T G A C T G A C T
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.86
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGTTTTT
NNHTGTGGTTWN-
 A C G T A C G T A C G T C G A T A T C G C A G T A C T G A T C G G A C T A C G T C A G T G A C T G A C T
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.80
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTTT
TTTGCGGTTT--
 A C G T A C G T C G A T A T C G C A G T A C T G A T C G G A C T A C G T C A G T G A C T G A C T
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.78
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTTT
TTGCGGTTT--
 A C G T C G A T A T C G C A G T A C T G A T C G G A C T A C G T C A G T G A C T G A C T
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGTGGTTTTT-
TGTGGATTNNN
 C G A T A T C G C A G T A C T G A T C G G A C T A C G T C A G T G A C T G A C T A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.69
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTTTTT
NNTGTGGATTSS
 A C G T A C G T C G A T A T C G C A G T A C T G A T C G G A C T A C G T C A G T G A C T G A C T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

Gfi1b/MA0483.1/Jaspar

Match Rank:10
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGTTTTT
TGCTGTGATTT--
 A C G T A C G T A C G T C G A T A T C G C A G T A C T G A T C G G A C T A C G T C A G T G A C T G A C T
C G A T C T A G G A T C G C A T A T C G C G A T A C T G T C G A A G C T A C G T A C G T A C G T A C G T