Information for 12-GCATTGCAAA (Motif 18)

A C T G G A T C G C T A A G C T A C G T C A T G A T G C C G T A T G C A T G C A
Reverse Opposite:
A C G T A C G T A C G T A T C G G T A C G T C A T C G A C G A T C T A G G T A C
p-value:1e-7
log p-value:-1.656e+01
Information Content per bp:1.661
Number of Target Sequences with motif72.0
Percentage of Target Sequences with motif8.04%
Number of Background Sequences with motif1961.6
Percentage of Background Sequences with motif4.07%
Average Position of motif in Targets53.7 +/- 27.5bp
Average Position of motif in Background49.5 +/- 29.1bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.03
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Ddit3::Cebpa/MA0019.1/Jaspar

Match Rank:1
Score:0.70
Offset:-1
Orientation:reverse strand
Alignment:-GCATTGCAAA-
GGGATTGCATNN
 A C G T A C T G G A T C G C T A A G C T A C G T C A T G A T G C C G T A T G C A T G C A A C G T
T C A G A T C G A C T G C T G A A C G T A C G T C A T G G T A C C T G A A G C T A G T C A G C T

CEBPA/MA0102.3/Jaspar

Match Rank:2
Score:0.68
Offset:2
Orientation:forward strand
Alignment:GCATTGCAAA---
--ATTGCACAATA
 A C T G G A T C G C T A A G C T A C G T C A T G A T G C C G T A T G C A T G C A A C G T A C G T A C G T
A C G T A C G T T C G A A C G T A C G T C A T G A G T C T G C A G A T C G T C A C G T A A G C T G T C A

PB0091.1_Zbtb3_1/Jaspar

Match Rank:3
Score:0.67
Offset:-4
Orientation:forward strand
Alignment:----GCATTGCAAA---
AATCGCACTGCATTCCG
 A C G T A C G T A C G T A C G T A C T G G A T C G C T A A G C T A C G T C A T G A T G C C G T A T G C A T G C A A C G T A C G T A C G T
C T G A C T G A A C G T A T G C A T C G G T A C C T G A A T G C C G A T A C T G A T G C G T C A A G C T A C G T A T G C A T G C A C T G

PB0145.1_Mafb_2/Jaspar

Match Rank:4
Score:0.65
Offset:0
Orientation:forward strand
Alignment:GCATTGCAAA-----
CAATTGCAAAAATAT
 A C T G G A T C G C T A A G C T A C G T C A T G A T G C C G T A T G C A T G C A A C G T A C G T A C G T A C G T A C G T
G T A C T C G A C G T A A C G T A C G T A C T G G A T C C T G A C G T A G C T A C G T A C G T A G C A T C T G A G C A T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:GCATTGCAAA--
--ACATCAAAGG
 A C T G G A T C G C T A A G C T A C G T C A T G A T G C C G T A T G C A T G C A A C G T A C G T
A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G

POU2F2/MA0507.1/Jaspar

Match Rank:6
Score:0.62
Offset:1
Orientation:reverse strand
Alignment:GCATTGCAAA----
-ATATGCAAATNNN
 A C T G G A T C G C T A A G C T A C G T C A T G A T G C C G T A T G C A T G C A A C G T A C G T A C G T A C G T
A C G T C G T A G A C T C T G A A C G T C T A G G A T C C G T A C G T A C G T A C G A T C A T G G T C A C T G A

Oct2(POU,Homeobox)/Bcell-Oct2-ChIP-Seq(GSE21512)/Homer

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:GCATTGCAAA-
-ATATGCAAAT
 A C T G G A T C G C T A A G C T A C G T C A T G A T G C C G T A T G C A T G C A A C G T
A C G T G T C A G C A T G C T A C A G T C T A G G A T C C G T A C T G A C G T A C G A T

Oct4(POU,Homeobox)/mES-Oct4-ChIP-Seq(GSE11431)/Homer

Match Rank:8
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GCATTGCAAA-
-TTATGCAAAT
 A C T G G A T C G C T A A G C T A C G T C A T G A T G C C G T A T G C A T G C A A C G T
A C G T C G A T G C A T C T G A A C G T A C T G A G T C C G T A C T G A C G T A C G A T

CTCF-SatelliteElement(Zf?)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.61
Offset:-12
Orientation:reverse strand
Alignment:------------GCATTGCAAA
TGGCCANNNNNGGAACTGCA--
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C T G G A T C G C T A A G C T A C G T C A T G A T G C C G T A T G C A T G C A
G C A T C T A G C A T G G A T C G A T C C T G A G A T C G C A T A C T G A G C T C A G T C T A G C A T G G C T A C G T A A G T C C G A T C T A G A T G C G C T A A C G T A C G T

CHR(?)/Hela-CellCycle-Expression/Homer

Match Rank:10
Score:0.60
Offset:0
Orientation:forward strand
Alignment:GCATTGCAAA
CGGTTTCAAA
 A C T G G A T C G C T A A G C T A C G T C A T G A T G C C G T A T G C A T G C A
T A G C T C A G C A T G G C A T A G C T C G A T A T G C C G T A C G T A G T C A