Information for 2-BVGCCACGTGGYN (Motif 2)

A T C G T A C G T C A G G T A C A G T C C T G A A G T C C T A G A G C T A T C G T A C G A G T C A G T C
Reverse Opposite:
T C A G T C A G A G T C T A G C C T G A A G T C C T A G G A C T A C T G C A T G A G T C A T G C T A G C
p-value:1e-52
log p-value:-1.217e+02
Information Content per bp:1.584
Number of Target Sequences with motif186.0
Percentage of Target Sequences with motif20.95%
Number of Background Sequences with motif2575.4
Percentage of Background Sequences with motif5.69%
Average Position of motif in Targets52.5 +/- 19.4bp
Average Position of motif in Background50.0 +/- 35.9bp
Strand Bias (log2 ratio + to - strand density)0.1
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Max(bHLH)/K562-Max-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.98
Offset:2
Orientation:forward strand
Alignment:BVGCCACGTGGYN-
--ACCACGTGGTNN
 A T C G T A C G T C A G G T A C A G T C C T G A A G T C C T A G A G C T A T C G T A C G A G T C A G T C A C G T
A C G T A C G T T C G A T G A C A G T C C G T A A G T C C T A G A C G T A C T G A C T G A G C T A G T C G C A T

BMAL1(bHLH)/Liver-Bmal1-ChIP-Seq(GSE39860)/Homer

Match Rank:2
Score:0.98
Offset:2
Orientation:forward strand
Alignment:BVGCCACGTGGYN
--GNCACGTG---
 A T C G T A C G T C A G G T A C A G T C C T G A A G T C C T A G A G C T A T C G T A C G A G T C A G T C
A C G T A C G T C T A G C A G T T G A C C G T A G A T C T C A G G A C T C A T G A C G T A C G T A C G T

CLOCK(bHLH)/Liver-Clock-ChIP-Seq(GSE39860)/Homer

Match Rank:3
Score:0.98
Offset:2
Orientation:forward strand
Alignment:BVGCCACGTGGYN
--GHCACGTG---
 A T C G T A C G T C A G G T A C A G T C C T G A A G T C C T A G A G C T A T C G T A C G A G T C A G T C
A C G T A C G T C T A G G C A T G A T C C G T A A G T C T C A G G A C T C T A G A C G T A C G T A C G T

NPAS(bHLH)/Liver-NPAS-ChIP-Seq(GSE39860)/Homer

Match Rank:4
Score:0.97
Offset:2
Orientation:forward strand
Alignment:BVGCCACGTGGYN
--NVCACGTG---
 A T C G T A C G T C A G G T A C A G T C C T G A A G T C C T A G A G C T A T C G T A C G A G T C A G T C
A C G T A C G T C G A T T G C A G T A C C G T A A G T C C T A G G A C T C A T G A C G T A C G T A C G T

c-Myc(bHLH)/mES-cMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:5
Score:0.97
Offset:3
Orientation:reverse strand
Alignment:BVGCCACGTGGYN
---CCACGTGGNN
 A T C G T A C G T C A G G T A C A G T C C T G A A G T C C T A G A G C T A T C G T A C G A G T C A G T C
A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G A G C T A C T G A T C G A G T C A G T C

n-Myc(bHLH)/mES-nMyc-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.97
Offset:3
Orientation:reverse strand
Alignment:BVGCCACGTGGYN
---CCACGTGGNN
 A T C G T A C G T C A G G T A C A G T C C T G A A G T C C T A G A G C T A T C G T A C G A G T C A G T C
A C G T A C G T A C G T T A G C A G T C C G T A A G T C C T A G G C A T A C T G A T C G A G C T A T G C

c-Myc(bHLH)/LNCAP-cMyc-ChIP-Seq(Unpublished)/Homer

Match Rank:7
Score:0.97
Offset:2
Orientation:forward strand
Alignment:BVGCCACGTGGYN
--NCCACGTG---
 A T C G T A C G T C A G G T A C A G T C C T G A A G T C C T A G A G C T A T C G T A C G A G T C A G T C
A C G T A C G T T C G A T A G C T G A C C T G A A G T C A C T G G A C T C A T G A C G T A C G T A C G T

MAX/MA0058.3/Jaspar

Match Rank:8
Score:0.97
Offset:2
Orientation:forward strand
Alignment:BVGCCACGTGGYN
--ACCACGTGCT-
 A T C G T A C G T C A G G T A C A G T C C T G A A G T C C T A G A G C T A T C G T A C G A G T C A G T C
A C G T A C G T T G C A T G A C G T A C C T G A A G T C T C A G G A C T A C T G A T G C G A C T A C G T

MNT/MA0825.1/Jaspar

Match Rank:9
Score:0.96
Offset:2
Orientation:forward strand
Alignment:BVGCCACGTGGYN
--ACCACGTGCC-
 A T C G T A C G T C A G G T A C A G T C C T G A A G T C C T A G A G C T A T C G T A C G A G T C A G T C
A C G T A C G T C T G A T A G C G T A C C G T A A G T C C T A G A C G T A C T G T G A C G A T C A C G T

Arnt/MA0004.1/Jaspar

Match Rank:10
Score:0.96
Offset:4
Orientation:forward strand
Alignment:BVGCCACGTGGYN
----CACGTG---
 A T C G T A C G T C A G G T A C A G T C C T G A A G T C C T A G A G C T A T C G T A C G A G T C A G T C
A C G T A C G T A C G T A C G T G T A C C T G A A G T C A C T G A C G T A C T G A C G T A C G T A C G T