Information for 17-AMATGCATGCATG (Motif 19)

C T G A G T A C G T C A G A C T C T A G G T A C C G T A C A G T A C T G G A T C C T G A G C A T C T A G
Reverse Opposite:
G A T C C G T A G A C T C T A G G T A C G T C A A C G T A C T G A G T C C T G A C A G T C A T G A G C T
p-value:1e-8
log p-value:-1.969e+01
Information Content per bp:1.636
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.27%
Number of Background Sequences with motif393.6
Percentage of Background Sequences with motif0.87%
Average Position of motif in Targets45.0 +/- 21.0bp
Average Position of motif in Background50.2 +/- 38.5bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.07
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0082.1_Irx2/Jaspar

Match Rank:1
Score:0.66
Offset:-1
Orientation:forward strand
Alignment:-AMATGCATGCATG---
TAAATACATGTAAAATT
 A C G T C T G A G T A C G T C A G A C T C T A G G T A C C G T A C A G T A C T G G A T C C T G A G C A T C T A G A C G T A C G T A C G T
C G A T C G T A C G T A C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A C G T A C T G A C G T A A C G T G C A T

PH0087.1_Irx6/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AMATGCATGCATG---
AAAATACATGTAAAAAT
 A C G T C T G A G T A C G T C A G A C T C T A G G T A C C G T A C A G T A C T G G A T C C T G A G C A T C T A G A C G T A C G T A C G T
G C T A G C T A G C T A C T G A C G A T C G T A A G T C C G T A G C A T C T A G C G A T G C T A G T C A C G T A C G T A G C T A C G A T

PH0086.1_Irx5/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AMATGCATGCATG---
AATATACATGTAAAATT
 A C G T C T G A G T A C G T C A G A C T C T A G G T A C C G T A C A G T A C T G G A T C C T G A G C A T C T A G A C G T A C G T A C G T
C G A T C G T A C G A T G C T A C G A T G C T A A G T C C G T A G C A T T C A G C G A T G C T A G T C A C G T A C G T A A C G T C G A T

PB0028.1_Hbp1_1/Jaspar

Match Rank:4
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-AMATGCATGCATG--
ACTATGAATGAATGAT
 A C G T C T G A G T A C G T C A G A C T C T A G G T A C C G T A C A G T A C T G G A T C C T G A G C A T C T A G A C G T A C G T
G C T A G T A C C G A T G C T A G C A T T A C G C G T A C G T A C G A T A C T G C T G A T C G A G A C T C A T G C T G A A G C T

PB0178.1_Sox8_2/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AMATGCATGCATG-
ACATTCATGACACG
 C T G A G T A C G T C A G A C T C T A G G T A C C G T A C A G T A C T G G A T C C T G A G C A T C T A G A C G T
C G T A G A T C G C T A A C G T C G A T G A T C T C G A A C G T C T A G G C T A G T A C G T C A A T G C T A C G

PH0083.1_Irx3_1/Jaspar

Match Rank:6
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AMATGCATGCATG---
AAAATACATGTAATACT
 A C G T C T G A G T A C G T C A G A C T C T A G G T A C C G T A C A G T A C T G G A T C C T G A G C A T C T A G A C G T A C G T A C G T
C G T A C T G A C G A T C T G A C G A T C G T A A G T C C G T A G C A T T A C G C G A T G C T A T G C A C G A T C G T A G A T C C G A T

PH0084.1_Irx3_2/Jaspar

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-AMATGCATGCATG---
AATATACATGTAATATA
 A C G T C T G A G T A C G T C A G A C T C T A G G T A C C G T A C A G T A C T G G A T C C T G A G C A T C T A G A C G T A C G T A C G T
C G T A C G T A C G A T C G T A C G A T C G T A G A T C C G T A G C A T C T A G C G A T G C T A T C G A C G A T C G T A G A C T C G A T

PB0170.1_Sox17_2/Jaspar

Match Rank:8
Score:0.62
Offset:-4
Orientation:forward strand
Alignment:----AMATGCATGCATG
GACCACATTCATACAAT
 A C G T A C G T A C G T A C G T C T G A G T A C G T C A G A C T C T A G G T A C C G T A C A G T A C T G G A T C C T G A G C A T C T A G
T A C G G C T A A G T C G T A C G T C A A G T C G C T A A G C T C G A T T G A C C T G A A G C T T C G A G A T C T C G A C G T A C G A T

PH0085.1_Irx4/Jaspar

Match Rank:9
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AMATGCATGCATG---
AATATACATGTAAAACA
 A C G T C T G A G T A C G T C A G A C T C T A G G T A C C G T A C A G T A C T G G A T C C T G A G C A T C T A G A C G T A C G T A C G T
C G T A C G T A G C A T C T G A C G A T C G T A A G T C C G T A G C A T C T A G G C A T G C T A G T C A C G T A C G T A A G T C C G T A

Arnt:Ahr(bHLH)/MCF7-Arnt-ChIP-Seq(Lo_et_al.)/Homer

Match Rank:10
Score:0.59
Offset:2
Orientation:forward strand
Alignment:AMATGCATGCATG
--TBGCACGCAA-
 C T G A G T A C G T C A G A C T C T A G G T A C C G T A C A G T A C T G G A T C C T G A G C A T C T A G
A C G T A C G T G C A T A T C G C A T G G T A C G C T A A G T C T C A G T G A C G T C A T G C A A C G T