Information for 16-CTGSCYTYTAGMG (Motif 18)

A G T C A C G T A C T G A T G C A G T C A G T C A C G T A G T C A G C T C G T A A C T G G T A C A C T G
Reverse Opposite:
G T A C C A T G A G T C A C G T C T G A C T A G C G T A C T A G A C T G A T C G A G T C C G T A A C T G
p-value:1e-8
log p-value:-2.061e+01
Information Content per bp:1.871
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.68%
Number of Background Sequences with motif5.0
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.8 +/- 16.4bp
Average Position of motif in Background46.3 +/- 11.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:1
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CTGSCYTYTAGMG
CTGACCTTTG---
 A G T C A C G T A C T G A T G C A G T C A G T C A C G T A G T C A G C T C G T A A C T G G T A C A C T G
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T

TATA-Box(TBP)/Promoter/Homer

Match Rank:2
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CTGSCYTYTAGMG--
---CCTTTTATAGNC
 A G T C A C G T A C T G A T G C A G T C A G T C A C G T A G T C A G C T C G T A A C T G G T A C A C T G A C G T A C G T
A C G T A C G T A C G T A T G C G A T C G A C T A G C T C G A T C G A T G T C A C G A T T C G A A T C G T A G C T A G C

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.61
Offset:-3
Orientation:forward strand
Alignment:---CTGSCYTYTAGMG----
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A G T C A C G T A C T G A T G C A G T C A G T C A C G T A G T C A G C T C G T A A C T G G T A C A C T G A C G T A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:4
Score:0.57
Offset:0
Orientation:reverse strand
Alignment:CTGSCYTYTAGMG-
NTGCCCTTGGGCGN
 A G T C A C G T A C T G A T G C A G T C A G T C A C G T A G T C A G C T C G T A A C T G G T A C A C T G A C G T
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G

CTCF/MA0139.1/Jaspar

Match Rank:5
Score:0.57
Offset:-2
Orientation:reverse strand
Alignment:--CTGSCYTYTAGMG----
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A G T C A C G T A C T G A T G C A G T C A G T C A C G T A G T C A G C T C G T A A C T G G T A C A C T G A C G T A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:6
Score:0.56
Offset:-5
Orientation:forward strand
Alignment:-----CTGSCYTYTAGMG--
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A G T C A C G T A C T G A T G C A G T C A G T C A C G T A G T C A G C T C G T A A C T G G T A C A C T G A C G T A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

PB0189.1_Tcfap2a_2/Jaspar

Match Rank:7
Score:0.55
Offset:0
Orientation:reverse strand
Alignment:CTGSCYTYTAGMG-
NTGCCCANNGGTNA
 A G T C A C G T A C T G A T G C A G T C A G T C A C G T A G T C A G C T C G T A A C T G G T A C A C T G A C G T
T G A C G C A T T C A G G T A C G A T C A G T C C G T A T A C G T C G A C T A G T C A G G A C T C A T G C T G A

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:8
Score:0.55
Offset:1
Orientation:reverse strand
Alignment:CTGSCYTYTAGMG
-TGACCTYA----
 A G T C A C G T A C T G A T G C A G T C A G T C A C G T A G T C A G C T C G T A A C T G G T A C A C T G
A C G T A G C T C T A G G C T A T G A C A T G C A G C T A G T C C G T A A C G T A C G T A C G T A C G T

Nur77(NR)/K562-NR4A1-ChIP-Seq(GSE31363)/Homer

Match Rank:9
Score:0.54
Offset:1
Orientation:forward strand
Alignment:CTGSCYTYTAGMG
-TGACCTTTNCNT
 A G T C A C G T A C T G A T G C A G T C A G T C A C G T A G T C A G C T C G T A A C T G G T A C A C T G
A C G T A C G T C T A G C G T A A G T C G T A C A C G T A C G T A C G T G T C A G T A C T G A C G A C T

Nr5a2/MA0505.1/Jaspar

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-CTGSCYTYTAGMG-
GCTGACCTTGAACTN
 A C G T A G T C A C G T A C T G A T G C A G T C A G T C A C G T A G T C A G C T C G T A A C T G G T A C A C T G A C G T
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T