Information for 12-TGAYYGAGGGCAG (Motif 11)

A C G T A C T G C G T A A G T C A G C T A C T G T C G A A C T G A C T G A C T G G T A C C G T A A C T G
Reverse Opposite:
A G T C A C G T A C T G A G T C A G T C G T A C A C G T A G T C T C G A C T A G C G A T A G T C C G T A
p-value:1e-10
log p-value:-2.447e+01
Information Content per bp:1.909
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets44.8 +/- 29.7bp
Average Position of motif in Background63.9 +/- 12.9bp
Strand Bias (log2 ratio + to - strand density)0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

THAP1/MA0597.1/Jaspar

Match Rank:1
Score:0.68
Offset:4
Orientation:reverse strand
Alignment:TGAYYGAGGGCAG
----TNNGGGCAG
 A C G T A C T G C G T A A G T C A G C T A C T G T C G A A C T G A C T G A C T G G T A C C G T A A C T G
A C G T A C G T A C G T A C G T C A G T T C A G G T A C C A T G C A T G C T A G G T A C C T G A T C A G

Hand2(bHLH)/Mesoderm-Hand2-ChIP-Seq(GSE61475)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:TGAYYGAGGGCAG--
TGACANARRCCAGRC
 A C G T A C T G C G T A A G T C A G C T A C T G T C G A A C T G A C T G A C T G G T A C C G T A A C T G A C G T A C G T
C G A T C T A G C T G A A T G C C T G A T C G A C G T A C T G A T C G A T A G C A G T C C G T A A C T G T C G A A T G C

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:3
Score:0.65
Offset:-1
Orientation:forward strand
Alignment:-TGAYYGAGGGCAG
CCGCCCAAGGGCAG
 A C G T A C G T A C T G C G T A A G T C A G C T A C T G T C G A A C T G A C T G A C T G G T A C C G T A A C T G
A T G C G A T C T C A G G T A C G A T C G A T C C G T A G C T A C T A G C T A G C A T G A G T C C G T A C T A G

TFAP2A(var.2)/MA0810.1/Jaspar

Match Rank:4
Score:0.63
Offset:0
Orientation:reverse strand
Alignment:TGAYYGAGGGCAG
TGCCCNGGGGCA-
 A C G T A C T G C G T A A G T C A G C T A C T G T C G A A C T G A C T G A C T G G T A C C G T A A C T G
G A C T T A C G T A G C A G T C A G T C A C T G T C A G T C A G T C A G A T C G A T G C C T G A A C G T

PB0086.1_Tcfap2b_1/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-TGAYYGAGGGCAG
TTGCCCTAGGGCAT
 A C G T A C G T A C T G C G T A A G T C A G C T A C T G T C G A A C T G A C T G A C T G G T A C C G T A A C T G
C G A T G A C T T A C G A T G C A G T C A G T C A G C T T C G A T C A G C T A G A T C G A T G C C T G A C G A T

TFAP2B/MA0811.1/Jaspar

Match Rank:6
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGAYYGAGGGCAG
TGCCCTNGGGCA-
 A C G T A C T G C G T A A G T C A G C T A C T G T C G A A C T G A C T G A C T G G T A C C G T A A C T G
G A C T T A C G A T G C A G T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T

Hoxb4(Homeobox)/ES-Hoxb4-ChIP-Seq(GSE34014)/Homer

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:TGAYYGAGGGCAG
TGATTRATGGCY-
 A C G T A C T G C G T A A G T C A G C T A C T G T C G A A C T G A C T G A C T G G T A C C G T A A C T G
C G A T C T A G T C G A A G C T C G A T C T G A C G T A A G C T A C T G C T A G A T G C G A T C A C G T

Hoxa9/MA0594.1/Jaspar

Match Rank:8
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGAYYGAGGGCAG
TGATTTATGGC--
 A C G T A C T G C G T A A G T C A G C T A C T G T C G A A C T G A C T G A C T G G T A C C G T A A C T G
C G A T C T A G G C T A A C G T C G A T A C G T C G T A A G C T C A T G C T A G A T G C A C G T A C G T

TFAP2C/MA0524.2/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:TGAYYGAGGGCAG
TGCCCTNGGGCA-
 A C G T A C T G C G T A A G T C A G C T A C T G T C G A A C T G A C T G A C T G G T A C C G T A A C T G
G A C T T A C G A T G C G A T C A G T C A G C T T C A G T C A G C T A G A T C G A T G C C T G A A C G T

THRb(NR)/Liver-NR1A2-ChIP-Seq(GSE52613)/Homer

Match Rank:10
Score:0.60
Offset:4
Orientation:forward strand
Alignment:TGAYYGAGGGCAG
----TRAGGTCA-
 A C G T A C T G C G T A A G T C A G C T A C T G T C G A A C T G A C T G A C T G G T A C C G T A A C T G
A C G T A C G T A C G T A C G T G C A T T C A G C T G A A T C G A C T G C G A T G A T C C T G A A C G T