Information for 10-GAAAGTACCHTTT (Motif 10)

A C T G C G T A C T G A C G T A A C T G A C G T G T C A A G T C A G T C G C T A C G A T A C G T A C G T
Reverse Opposite:
G T C A C G T A C G T A C A G T A C T G A C T G A C G T C G T A A G T C C G A T A G C T A C G T A G T C
p-value:1e-13
log p-value:-3.082e+01
Information Content per bp:1.849
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif1.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets39.2 +/- 28.9bp
Average Position of motif in Background44.1 +/- 16.0bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFkB-p65-Rel(RHD)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:1
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GAAAGTACCHTTT
GGAAATTCCC----
 A C G T A C T G C G T A C T G A C G T A A C T G A C G T G T C A A G T C A G T C G C T A C G A T A C G T A C G T
A C T G C A T G G C T A T C G A G C T A A G C T A G C T G T A C A G T C T G A C A C G T A C G T A C G T A C G T

RELA/MA0107.1/Jaspar

Match Rank:2
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGTACCHTTT
GGAAATTCCC----
 A C G T A C T G C G T A C T G A C G T A A C T G A C G T G T C A A G T C A G T C G C T A C G A T A C G T A C G T
A C T G A C T G C T G A C G T A C G T A A G C T A G C T A G T C G T A C T A G C A C G T A C G T A C G T A C G T

PB0134.1_Hnf4a_2/Jaspar

Match Rank:3
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GAAAGTACCHTTT
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A C T G C G T A C T G A C G T A A C T G A C G T G T C A A G T C A G T C G C T A C G A T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

DMRT3/MA0610.1/Jaspar

Match Rank:4
Score:0.56
Offset:1
Orientation:forward strand
Alignment:GAAAGTACCHTTT
-AATGTATCAAT-
 A C T G C G T A C T G A C G T A A C T G A C G T G T C A A G T C A G T C G C T A C G A T A C G T A C G T
A C G T G T C A C G T A C G A T A C T G A C G T C G T A C G A T A G T C G T C A C G T A A C G T A C G T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.55
Offset:-6
Orientation:reverse strand
Alignment:------GAAAGTACCHTTT
GAAAGTGAAAGT-------
 A C G T A C G T A C G T A C G T A C G T A C G T A C T G C G T A C T G A C G T A A C T G A C G T G T C A A G T C A G T C G C T A C G A T A C G T A C G T
T C A G C G T A T G C A C T G A C T A G C G A T C T A G G C T A T C G A C G T A A C T G A G C T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0096.1_Zfp187_1/Jaspar

Match Rank:6
Score:0.55
Offset:0
Orientation:forward strand
Alignment:GAAAGTACCHTTT-
TTATGTACTAATAA
 A C T G C G T A C T G A C G T A A C T G A C G T G T C A A G T C A G T C G C T A C G A T A C G T A C G T A C G T
A G C T G A C T T C G A G A C T C T A G C G A T C T G A A G T C A G C T G C T A C G T A C G A T C G T A G T C A

MF0003.1_REL_class/Jaspar

Match Rank:7
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGTACCHTTT
GGAAATCCCC----
 A C G T A C T G C G T A C T G A C G T A A C T G A C G T G T C A A G T C A G T C G C T A C G A T A C G T A C G T
C A T G C T A G C T G A T C G A G C T A C G A T G A T C G T A C T G A C T A G C A C G T A C G T A C G T A C G T

REL/MA0101.1/Jaspar

Match Rank:8
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGTACCHTTT
GGAAANCCCC----
 A C G T A C T G C G T A C T G A C G T A A C T G A C G T G T C A A G T C A G T C G C T A C G A T A C G T A C G T
A C T G C T A G C G T A C G T A C G T A A C G T G A T C G A T C T A G C T A G C A C G T A C G T A C G T A C G T

PB0152.1_Nkx3-1_2/Jaspar

Match Rank:9
Score:0.54
Offset:-2
Orientation:reverse strand
Alignment:--GAAAGTACCHTTT--
TTCNAAGTACTTNNNNN
 A C G T A C G T A C T G C G T A C T G A C G T A A C T G A C G T G T C A A G T C A G T C G C T A C G A T A C G T A C G T A C G T A C G T
C A G T A C G T A G T C T G A C C T G A C T G A C A T G A G C T T C G A G T A C G A C T G A C T A T C G T A C G G C T A C A T G A G C T

NFkB-p65(RHD)/GM12787-p65-ChIP-Seq(GSE19485)/Homer

Match Rank:10
Score:0.54
Offset:-1
Orientation:reverse strand
Alignment:-GAAAGTACCHTTT
GGGAAATCCCCN--
 A C G T A C T G C G T A C T G A C G T A A C T G A C G T G T C A A G T C A G T C G C T A C G A T A C G T A C G T
C A T G C T A G C T A G C T G A G C T A C G T A A G C T G A T C G T A C G T A C G T A C G C A T A C G T A C G T