Information for 7-STKCCGAGAMWGA (Motif 9)

A T G C A C G T A C T G A G T C T A G C A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A
Reverse Opposite:
A C G T A G T C C G A T A C G T A C G T A G T C A C G T A G T C A C T G A C T G G T A C C G T A A T C G
p-value:1e-12
log p-value:-2.980e+01
Information Content per bp:1.874
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.0
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets53.8 +/- 27.9bp
Average Position of motif in Background0.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)-1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0138.1_Irf4_2/Jaspar

Match Rank:1
Score:0.68
Offset:-1
Orientation:reverse strand
Alignment:-STKCCGAGAMWGA-
GNNACCGAGAATNNN
 A C G T A T G C A C G T A C T G A G T C T A G C A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A A C G T
A T C G G T A C C T G A G C T A A G T C A G T C C A T G T C G A C A T G G C T A C T G A C G A T T C G A A T G C A G C T

PB0140.1_Irf6_2/Jaspar

Match Rank:2
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-STKCCGAGAMWGA-
NNNACCGAGAGTNNN
 A C G T A T G C A C G T A C T G A G T C T A G C A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A A C G T
A T C G G A C T C A T G G T C A A G T C G A T C C T A G T C G A T A C G G T C A C A T G C G A T T C A G T A C G A C G T

Stat5a::Stat5b/MA0519.1/Jaspar

Match Rank:3
Score:0.64
Offset:-1
Orientation:forward strand
Alignment:-STKCCGAGAMWGA
ATTTCCAAGAA---
 A C G T A T G C A C G T A C T G A G T C T A G C A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A
C T G A A G C T A C G T A G C T A G T C G A T C G T C A C T G A A C T G G C T A C T G A A C G T A C G T A C G T

PB0006.1_Bcl6b_1/Jaspar

Match Rank:4
Score:0.64
Offset:-3
Orientation:reverse strand
Alignment:---STKCCGAGAMWGA
NNNATTCCTCGAAAGN
 A C G T A C G T A C G T A T G C A C G T A C T G A G T C T A G C A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A
A T G C C T G A C G T A C G T A C G A T G C A T G T A C A G T C G C A T T G A C C T A G G C T A C G T A C T G A C T A G G C T A

Bcl6/MA0463.1/Jaspar

Match Rank:5
Score:0.63
Offset:0
Orientation:forward strand
Alignment:STKCCGAGAMWGA-
TTTCCTAGAAAGCA
 A T G C A C G T A C T G A G T C T A G C A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A A C G T
C A G T C G A T A G C T G T A C A G T C A C G T T C G A C T A G C T G A T C G A C T G A C A T G G T A C G C T A

Stat3(Stat)/mES-Stat3-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.63
Offset:0
Orientation:forward strand
Alignment:STKCCGAGAMWGA
CTTCCNGGAA---
 A T G C A C G T A C T G A G T C T A G C A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A
A G T C G A C T C A G T G T A C A G T C A T C G T C A G A C T G G T C A C G T A A C G T A C G T A C G T

STAT5(Stat)/mCD4+-Stat5-ChIP-Seq(GSE12346)/Homer

Match Rank:7
Score:0.63
Offset:-1
Orientation:forward strand
Alignment:-STKCCGAGAMWGA
NTTTCTNAGAAA--
 A C G T A T G C A C G T A C T G A G T C T A G C A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A
C T G A A C G T A C G T A C G T A G T C G A C T C G A T C T G A A C T G C G T A C G T A T C G A A C G T A C G T

Stat4/MA0518.1/Jaspar

Match Rank:8
Score:0.62
Offset:0
Orientation:forward strand
Alignment:STKCCGAGAMWGA-
TTTCCAGGAAATGG
 A T G C A C G T A C T G A G T C T A G C A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A A C G T
A G C T G C A T C A G T T G A C G A T C C T G A C T A G C T A G C G T A C G T A T C G A A G C T T A C G T C A G

Bcl6(Zf)/Liver-Bcl6-ChIP-Seq(GSE31578)/Homer

Match Rank:9
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:STKCCGAGAMWGA--
TTTCCTGGAAAGNNN
 A T G C A C G T A C T G A G T C T A G C A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A A C G T A C G T
G A C T A G C T A G C T G A T C G A T C G C A T C T A G T C A G T C G A T C G A C T G A C T A G A G T C G C T A C T G A

STAT3/MA0144.2/Jaspar

Match Rank:10
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:STKCCGAGAMWGA
TTTCCCAGAAN--
 A T G C A C G T A C T G A G T C T A G C A C T G C G T A A C T G C G T A G T C A C G T A A C T G C G T A
G A C T A C G T A C G T G A T C A G T C G T A C C T G A C T A G T G C A C G T A T C A G A C G T A C G T