Information for 10-GCAGACGGAC (Motif 7)

C T A G G T A C G C T A A C T G G T C A A G T C T C A G T A C G C G T A A T G C
Reverse Opposite:
A T C G G C A T A T G C A G T C T C A G C A G T A G T C C G A T A C T G A G T C
p-value:1e-13
log p-value:-3.162e+01
Information Content per bp:1.669
Number of Target Sequences with motif28.0
Percentage of Target Sequences with motif3.01%
Number of Background Sequences with motif204.4
Percentage of Background Sequences with motif0.46%
Average Position of motif in Targets48.9 +/- 27.7bp
Average Position of motif in Background50.1 +/- 36.3bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:GCAGACGGAC
CCAGACRSVB
 C T A G G T A C G C T A A C T G G T C A A G T C T C A G T A C G C G T A A T G C
T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:reverse strand
Alignment:GCAGACGGAC
CCAGACAG--
 C T A G G T A C G C T A A C T G G T C A A G T C T C A G T A C G C G T A A T G C
A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T A C G T

Tbox:Smad(T-box,MAD)/ESCd5-Smad2_3-ChIP-Seq(GSE29422)/Homer

Match Rank:3
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GCAGACGGAC-
AGGTGHCAGACA
 A C G T C T A G G T A C G C T A A C T G G T C A A G T C T C A G T A C G C G T A A T G C A C G T
C T G A C T A G A T C G G C A T A C T G G T A C A T G C C G T A A C T G G C T A A G T C C G T A

PB0151.1_Myf6_2/Jaspar

Match Rank:4
Score:0.60
Offset:-4
Orientation:forward strand
Alignment:----GCAGACGGAC-
AGCAACAGCCGCACC
 A C G T A C G T A C G T A C G T C T A G G T A C G C T A A C T G G T C A A G T C T C A G T A C G C G T A A T G C A C G T
T C G A T A C G T G A C T C G A T G C A G A T C T C G A C T A G T G A C T A G C A T C G T A G C C T G A T G A C G A T C

SMAD2::SMAD3::SMAD4/MA0513.1/Jaspar

Match Rank:5
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCAGACGGAC--
AGGTGNCAGACAG
 A C G T C T A G G T A C G C T A A C T G G T C A A G T C T C A G T A C G C G T A A T G C A C G T A C G T
C T G A C T A G A T C G C G A T A T C G G T C A A T G C C G T A A C T G T G C A A G T C C G T A A T C G

NeuroG2(bHLH)/Fibroblast-NeuroG2-ChIP-Seq(GSE75910)/Homer

Match Rank:6
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GCAGACGGAC
AACAGATGGT-
 A C G T C T A G G T A C G C T A A C T G G T C A A G T C T C A G T A C G C G T A A T G C
T C G A T C G A A G T C C G T A A C T G G T C A G C A T A C T G A C T G A G C T A C G T

MafA(bZIP)/Islet-MafA-ChIP-Seq(GSE30298)/Homer

Match Rank:7
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCAGACGGAC
TGCTGACTCA-
 A C G T C T A G G T A C G C T A A C T G G T C A A G T C T C A G T A C G C G T A A T G C
G A C T C T A G G A T C C A G T A C T G C T G A A T G C G C A T A T G C C T G A A C G T

NeuroD1(bHLH)/Islet-NeuroD1-ChIP-Seq(GSE30298)/Homer

Match Rank:8
Score:0.58
Offset:-1
Orientation:reverse strand
Alignment:-GCAGACGGAC
AACAGATGGC-
 A C G T C T A G G T A C G C T A A C T G G T C A A G T C T C A G T A C G C G T A A T G C
C T G A T C G A A G T C G T C A A C T G T G C A G C A T A C T G A C T G A G T C A C G T

Mafb/MA0117.2/Jaspar

Match Rank:9
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GCAGACGGAC
AAAATGCTGACT---
 A C G T A C G T A C G T A C G T A C G T C T A G G T A C G C T A A C T G G T C A A G T C T C A G T A C G C G T A A T G C
C G T A C G T A G C T A C G T A G A C T A T C G G T A C G A C T C A T G C T G A A T G C C A G T A C G T A C G T A C G T

NRL/MA0842.1/Jaspar

Match Rank:10
Score:0.55
Offset:-5
Orientation:forward strand
Alignment:-----GCAGACGGAC
AATTTGCTGAC----
 A C G T A C G T A C G T A C G T A C G T C T A G G T A C G C T A A C T G G T C A A G T C T C A G T A C G C G T A A T G C
C G T A C G T A G C A T G C A T G A C T T C A G G T A C G C A T C A T G G C T A A G T C A C G T A C G T A C G T A C G T