Information for 3-WAGRGGCGGG (Motif 3)

G C T A T C G A C T A G C T A G C T A G A C T G A G T C A C T G A C T G C T A G
Reverse Opposite:
G A T C G T A C A G T C C T A G A G T C A G T C G A T C G A T C A G C T C G A T
p-value:1e-48
log p-value:-1.123e+02
Information Content per bp:1.672
Number of Target Sequences with motif200.0
Percentage of Target Sequences with motif21.51%
Number of Background Sequences with motif2933.0
Percentage of Background Sequences with motif6.61%
Average Position of motif in Targets49.6 +/- 28.6bp
Average Position of motif in Background48.4 +/- 34.2bp
Strand Bias (log2 ratio + to - strand density)-0.1
Multiplicity (# of sites on avg that occur together)1.10
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SP2/MA0516.1/Jaspar

Match Rank:1
Score:0.87
Offset:-3
Orientation:reverse strand
Alignment:---WAGRGGCGGG--
GGGNGGGGGCGGGGC
 A C G T A C G T A C G T G C T A T C G A C T A G C T A G C T A G A C T G A G T C A C T G A C T G C T A G A C G T A C G T
T A C G T A C G T A C G T C G A C T A G C T A G C T A G C T A G A C T G G T A C C T A G A T C G C T A G T C A G T A G C

POL003.1_GC-box/Jaspar

Match Rank:2
Score:0.85
Offset:0
Orientation:forward strand
Alignment:WAGRGGCGGG----
AGGGGGCGGGGCTG
 G C T A T C G A C T A G C T A G C T A G A C T G A G T C A C T G A C T G C T A G A C G T A C G T A C G T A C G T
C G T A C T A G C A T G T C A G A C T G C T A G G T A C C T A G A C T G C T A G C A T G A G T C A G C T C A T G

SP1/MA0079.3/Jaspar

Match Rank:3
Score:0.84
Offset:1
Orientation:reverse strand
Alignment:WAGRGGCGGG--
-GGGGGCGGGGC
 G C T A T C G A C T A G C T A G C T A G A C T G A G T C A C T G A C T G C T A G A C G T A C G T
A C G T T C A G C T A G C T A G A C T G A C T G G T A C C T A G A C T G C T A G T C A G T G A C

PB0164.1_Smad3_2/Jaspar

Match Rank:4
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--WAGRGGCGGG-----
NAGANTGGCGGGGNGNA
 A C G T A C G T G C T A T C G A C T A G C T A G C T A G A C T G A G T C A C T G A C T G C T A G A C G T A C G T A C G T A C G T A C G T
T G A C C T G A T C A G C T G A C A T G A C G T C A T G T C A G A T G C T A C G A T C G T C A G C T A G T A G C C A T G C A G T G T C A

PB0076.1_Sp4_1/Jaspar

Match Rank:5
Score:0.82
Offset:-4
Orientation:reverse strand
Alignment:----WAGRGGCGGG---
NNNAAGGGGGCGGGNNN
 A C G T A C G T A C G T A C G T G C T A T C G A C T A G C T A G C T A G A C T G A G T C A C T G A C T G C T A G A C G T A C G T A C G T
T A C G T C G A A T C G C T G A C T G A C T A G C A T G C T A G A T C G A C T G G A T C A C T G A C T G C A T G C T G A G A T C T G A C

PB0039.1_Klf7_1/Jaspar

Match Rank:6
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-WAGRGGCGGG-----
NNAGGGGCGGGGTNNA
 A C G T G C T A T C G A C T A G C T A G C T A G A C T G A G T C A C T G A C T G C T A G A C G T A C G T A C G T A C G T A C G T
G C T A C G A T C T G A C T A G C T A G A C T G A C T G G A T C C A T G A C T G C A T G C A T G A G C T G A T C T C A G C G T A

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:7
Score:0.81
Offset:0
Orientation:forward strand
Alignment:WAGRGGCGGG--
RGKGGGCGGAGC
 G C T A T C G A C T A G C T A G C T A G A C T G A G T C A C T G A C T G C T A G A C G T A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C

Sp1(Zf)/Promoter/Homer

Match Rank:8
Score:0.80
Offset:1
Orientation:reverse strand
Alignment:WAGRGGCGGG---
-GGGGGCGGGGCC
 G C T A T C G A C T A G C T A G C T A G A C T G A G T C A C T G A C T G C T A G A C G T A C G T A C G T
A C G T T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:9
Score:0.79
Offset:0
Orientation:forward strand
Alignment:WAGRGGCGGG--
RGKGGGCGKGGC
 G C T A T C G A C T A G C T A G C T A G A C T G A G T C A C T G A C T G C T A G A C G T A C G T
C T A G T C A G C A G T T C A G A C T G A C T G G A T C C T A G A C T G C T A G T C A G A T G C

PB0110.1_Bcl6b_2/Jaspar

Match Rank:10
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---WAGRGGCGGG---
NNTNAGGGGCGGNNNN
 A C G T A C G T A C G T G C T A T C G A C T A G C T A G C T A G A C T G A G T C A C T G A C T G C T A G A C G T A C G T A C G T
A C G T C G A T C A G T C A G T G C T A T A C G T A C G A C T G C A T G G A T C C T A G C T A G T A C G T A C G T C G A C A G T