Information for 13-CAGCTCCGCCGCA (Motif 22)

A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A G T C G T A C A C T G A G T C G T C A
Reverse Opposite:
C A G T A C T G A G T C A C T G A C T G A G T C A C T G A C T G C T G A A C T G A G T C A C G T A C T G
p-value:1e-8
log p-value:-1.914e+01
Information Content per bp:1.915
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif6.8
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets44.2 +/- 31.6bp
Average Position of motif in Background58.3 +/- 38.2bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

POL003.1_GC-box/Jaspar

Match Rank:1
Score:0.69
Offset:0
Orientation:reverse strand
Alignment:CAGCTCCGCCGCA-
NAGCCCCGCCCCCN
 A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A G T C G T A C A C T G A G T C G T C A A C G T
G T A C T C G A T C A G G T A C G A T C T G A C G A T C C A T G A G T C A G T C A G T C G T A C G A T C G C A T

Sp1(Zf)/Promoter/Homer

Match Rank:2
Score:0.67
Offset:1
Orientation:forward strand
Alignment:CAGCTCCGCCGCA
-GGCCCCGCCCCC
 A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A G T C G T A C A C T G A G T C G T C A
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

POL013.1_MED-1/Jaspar

Match Rank:3
Score:0.67
Offset:2
Orientation:forward strand
Alignment:CAGCTCCGCCGCA
--GCTCCG-----
 A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A G T C G T A C A C T G A G T C G T C A
A C G T A C G T A C T G A G T C A C G T A G T C A G T C A T C G A C G T A C G T A C G T A C G T A C G T

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:4
Score:0.66
Offset:2
Orientation:reverse strand
Alignment:CAGCTCCGCCGCA-
--GCTCCGCCCMCY
 A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A G T C G T A C A C T G A G T C G T C A A C G T
A C G T A C G T C T A G A G T C G A C T G T A C A T G C C T A G A G T C A G T C A G T C G T C A A G T C G A C T

SP1/MA0079.3/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:CAGCTCCGCCGCA
--GCCCCGCCCCC
 A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A G T C G T A C A C T G A G T C G T C A
A C G T A C G T A C T G A G T C G A T C A G T C A G T C C A T G A G T C A G T C A G T C G A T C A G T C

SP2/MA0516.1/Jaspar

Match Rank:6
Score:0.62
Offset:2
Orientation:forward strand
Alignment:CAGCTCCGCCGCA----
--GCCCCGCCCCCTCCC
 A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A G T C G T A C A C T G A G T C G T C A A C G T A C G T A C G T A C G T
A C G T A C G T A T C G A G T C G A T C A T G C A G T C C A T G A G T C A G T C A G T C G A T C G A T C A G C T A T G C A T G C A T G C

PB0164.1_Smad3_2/Jaspar

Match Rank:7
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-CAGCTCCGCCGCA---
TACGCCCCGCCACTCTG
 A C G T A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A G T C G T A C A C T G A G T C G T C A A C G T A C G T A C G T
C A G T G T C A G T A C A C T G G A T C A G T C T A G C A T G C T A C G A G T C G T A C G T C A G T A C G A C T A G T C G A C T A C T G

NHLH1/MA0048.2/Jaspar

Match Rank:8
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--CAGCTCCGCCGCA
CGCAGCTGCG-----
 A C G T A C G T A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A G T C G T A C A C T G A G T C G T C A
T G A C C T A G A T G C T C G A A T C G T A G C A C G T A C T G A G T C A C T G A C G T A C G T A C G T A C G T A C G T

PB0110.1_Bcl6b_2/Jaspar

Match Rank:9
Score:0.58
Offset:1
Orientation:forward strand
Alignment:CAGCTCCGCCGCA----
-ATCCCCGCCCCTAAAA
 A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A G T C G T A C A C T G A G T C G T C A A C G T A C G T A C G T A C G T
A C G T G T C A A C G T A T G C A T G C A G T C G A T C C T A G G A T C T G A C A T G C A G T C C G A T G C T A G T C A G C T A T G C A

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:CAGCTCCGCCGCA
--GCTCGGSCTC-
 A G T C C G T A A C T G A G T C A G C T A G T C A G T C A C T G A G T C G T A C A C T G A G T C G T C A
A C G T A C G T C T A G G T A C A C G T A T G C C T A G A C T G T A C G A G T C A C G T A G T C A C G T