Information for 18-GGCCAACAGA (Motif 20)

A C T G A C T G A G T C A G T C C G T A G T C A G T A C C G T A A C T G C G T A
Reverse Opposite:
C G A T A G T C A C G T A C T G A C G T A C G T A C T G A C T G A G T C A G T C
p-value:1e-8
log p-value:-1.975e+01
Information Content per bp:1.933
Number of Target Sequences with motif10.0
Percentage of Target Sequences with motif1.08%
Number of Background Sequences with motif32.1
Percentage of Background Sequences with motif0.07%
Average Position of motif in Targets55.3 +/- 21.7bp
Average Position of motif in Background48.6 +/- 28.2bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFIC/MA0161.1/Jaspar

Match Rank:1
Score:0.67
Offset:0
Orientation:reverse strand
Alignment:GGCCAACAGA
TGCCAA----
 A C T G A C T G A G T C A G T C C G T A G T C A G T A C C G T A A C T G C G T A
G C A T C A T G G A T C A G T C G T C A C T G A A C G T A C G T A C G T A C G T

NFIX/MA0671.1/Jaspar

Match Rank:2
Score:0.66
Offset:-2
Orientation:forward strand
Alignment:--GGCCAACAGA
CGTGCCAAG---
 A C G T A C G T A C T G A C T G A G T C A G T C C G T A G T C A G T A C C G T A A C T G C G T A
T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G A C G T A C G T A C G T

NFIA/MA0670.1/Jaspar

Match Rank:3
Score:0.62
Offset:-2
Orientation:forward strand
Alignment:--GGCCAACAGA
GGTGCCAAGT--
 A C G T A C G T A C T G A C T G A G T C A G T C C G T A G T C A G T A C C G T A A C T G C G T A
T C A G C A T G A C G T A C T G A G T C A G T C C G T A C G T A T C A G C G A T A C G T A C G T

Foxo1(Forkhead)/RAW-Foxo1-ChIP-Seq(Fan_et_al.)/Homer

Match Rank:4
Score:0.61
Offset:1
Orientation:reverse strand
Alignment:GGCCAACAGA
-GTAAACAG-
 A C T G A C T G A G T C A G T C C G T A G T C A G T A C C G T A A C T G C G T A
A C G T C T A G C A G T G T C A C G T A C T G A A G T C C G T A T A C G A C G T

PB0150.1_Mybl1_2/Jaspar

Match Rank:5
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GGCCAACAGA----
CGACCAACTGCCGTG
 A C G T A C T G A C T G A G T C A G T C C G T A G T C A G T A C C G T A A C T G C G T A A C G T A C G T A C G T A C G T
A G T C A T C G T G C A G A T C G A T C G C T A G T C A A G T C A G C T A C T G G A T C G T A C C T A G G C A T A C T G

CTCF/MA0139.1/Jaspar

Match Rank:6
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGCCAACAGA--------
TGGCCACCAGGGGGCGCTA
 A C G T A C T G A C T G A G T C A G T C C G T A G T C A G T A C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G T A C C G T A T A G C G A T C C T G A C T A G C T A G C A T G C T A G C A T G G T A C C T A G T A G C G A C T T C G A

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GGCCAACAGA
CAAAGGTCAAGGG-
 A C G T A C G T A C G T A C G T A C T G A C T G A G T C A G T C C G T A G T C A G T A C C G T A A C T G C G T A
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G A C G T

Hic1/MA0739.1/Jaspar

Match Rank:8
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GGCCAACAGA
ATGCCAACC--
 A C G T A C T G A C T G A G T C A G T C C G T A G T C A G T A C C G T A A C T G C G T A
T C G A A G C T T C A G T A G C G T A C G T C A T C G A A T G C A G T C A C G T A C G T

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:9
Score:0.59
Offset:-1
Orientation:reverse strand
Alignment:-GGCCAACAGA---------
TGGCCACCAGGTGGCACTNT
 A C G T A C T G A C T G A G T C A G T C C G T A G T C A G T A C C G T A A C T G C G T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G C T A G G T A C G A T C C G T A T A G C G A T C C T G A A C T G T C A G C A G T C T A G C A T G G A T C C T G A T A G C G A C T T C G A A C G T

AMYB(HTH)/Testes-AMYB-ChIP-Seq(GSE44588)/Homer

Match Rank:10
Score:0.58
Offset:2
Orientation:reverse strand
Alignment:GGCCAACAGA--
--CCAACTGCCA
 A C T G A C T G A G T C A G T C C G T A G T C A G T A C C G T A A C T G C G T A A C G T A C G T
A C G T A C G T A G T C G A T C C G T A C G T A A G T C A C G T A C T G G A T C G A T C C T G A