Information for 11-CTGCCMMTGGTCCTGA (Motif 19)

A G T C A C G T A C T G A G T C A G T C G T A C G T C A A C G T A C T G A T C G A C G T A G T C A G T C C G A T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A C T A G T A C G G T C A A T G C A G T C C G T A A C G T A C T G A C T G T C A G A G T C G T C A C T A G
p-value:1e-8
log p-value:-2.022e+01
Information Content per bp:1.781
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif5.7
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets59.6 +/- 21.2bp
Average Position of motif in Background57.1 +/- 18.4bp
Strand Bias (log2 ratio + to - strand density)1.3
Multiplicity (# of sites on avg that occur together)1.17
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

REST-NRSF(Zf)/Jurkat-NRSF-ChIP-Seq/Homer

Match Rank:1
Score:0.80
Offset:-4
Orientation:forward strand
Alignment:----CTGCCMMTGGTCCTGA
GGAGCTGTCCATGGTGCTGA
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A G T C G T A C G T C A A C G T A C T G A T C G A C G T A G T C A G T C C G A T A C T G C G T A
C T A G A T C G G T C A C A T G A G T C G A C T T A C G C A G T A G T C A G T C C T G A C G A T C T A G A T C G G A C T A T C G A G T C G A C T C T A G T C G A

REST/MA0138.2/Jaspar

Match Rank:2
Score:0.80
Offset:-4
Orientation:reverse strand
Alignment:----CTGCCMMTGGTCCTGA-
GGCGCTGTCCATGGTGCTGAA
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A G T C G T A C G T C A A C G T A C T G A T C G A C G T A G T C A G T C C G A T A C T G C G T A A C G T
C T A G A T C G G T A C C A T G A G T C C G A T T A C G C A G T A G T C A G T C C T G A C G A T C T A G T A C G G A C T T A C G A T G C A G C T C T A G T C G A G T C A

ZNF322(Zf)/HEK293-ZNF322.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.53
Offset:-4
Orientation:forward strand
Alignment:----CTGCCMMTGGTCCTGA
GAGCCTGGTACTGWGCCTGR
 A C G T A C G T A C G T A C G T A G T C A C G T A C T G A G T C A G T C G T A C G T C A A C G T A C T G A T C G A C G T A G T C A G T C C G A T A C T G C G T A
T A C G C T G A C A T G G A T C G T A C G C A T T C A G T A C G A G C T G T C A G A T C G C A T T A C G C G T A C T A G G A T C G A T C C G A T A C T G T C A G

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.52
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCMMTGGTCCTGA
BNTGDCCTTG-------
 A C G T A G T C A C G T A C T G A G T C A G T C G T A C G T C A A C G T A C T G A T C G A C G T A G T C A G T C C G A T A C T G C G T A
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0191.1_Tcfap2c_2/Jaspar

Match Rank:5
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:CTGCCMMTGGTCCTGA
NTGCCCTTGGGCGN--
 A G T C A C G T A C T G A G T C A G T C G T A C G T C A A C G T A C T G A T C G A C G T A G T C A G T C C G A T A C T G C G T A
G A T C G C A T T C A G G T A C G A T C G A T C C G A T G A C T C T A G C T A G C A T G A G T C C T A G T A C G A C G T A C G T

Nr5a2/MA0505.1/Jaspar

Match Rank:6
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCMMTGGTCCTGA
GCTGACCTTGAACTN--
 A C G T A G T C A C G T A C T G A G T C A G T C G T A C G T C A A C G T A C T G A T C G A C G T A G T C A G T C C G A T A C T G C G T A
T A C G T G A C G C A T T C A G C T G A A G T C A G T C A G C T C A G T A T C G C T G A T C G A G A T C G A C T A G C T A C G T A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.49
Offset:0
Orientation:reverse strand
Alignment:CTGCCMMTGGTCCTGA
CTGACCTTTG------
 A G T C A C G T A C T G A G T C A G T C G T A C G T C A A C G T A C T G A T C G A C G T A G T C A G T C C G A T A C T G C G T A
A T G C A C G T T A C G T G C A G T A C A G T C G A C T A G C T A C G T T C A G A C G T A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/Pancreas-LRH1-ChIP-Seq(GSE34295)/Homer

Match Rank:8
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CTGCCMMTGGTCCTGA
-TGACCTTGAV-----
 A G T C A C G T A C T G A G T C A G T C G T A C G T C A A C G T A C T G A T C G A C G T A G T C A G T C C G A T A C T G C G T A
A C G T G C A T C T A G C T G A G A T C G T A C G A C T G A C T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T

Nr5a2(NR)/mES-Nr5a2-ChIP-Seq(GSE19019)/Homer

Match Rank:9
Score:0.49
Offset:1
Orientation:reverse strand
Alignment:CTGCCMMTGGTCCTGA
-TGACCTTGAN-----
 A G T C A C G T A C T G A G T C A G T C G T A C G T C A A C G T A C T G A T C G A C G T A G T C A G T C C G A T A C T G C G T A
A C G T G C A T C T A G C T G A T G A C G A T C A G C T C A G T A T C G C T G A T G C A A C G T A C G T A C G T A C G T A C G T

MEIS2/MA0774.1/Jaspar

Match Rank:10
Score:0.48
Offset:-1
Orientation:reverse strand
Alignment:-CTGCCMMTGGTCCTGA
GCTGTCAA---------
 A C G T A G T C A C G T A C T G A G T C A G T C G T A C G T C A A C G T A C T G A T C G A C G T A G T C A G T C C G A T A C T G C G T A
A T C G A T G C A C G T C A T G G C A T A G T C G T C A G C T A A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T