Information for 12-SAGGCCCCGCAAC (Motif 17)

A T C G C T G A A T C G A C T G A T G C A T G C A G T C T G A C A C T G A G T C C T G A T C G A A G T C
Reverse Opposite:
A C T G A G C T A G C T A C T G A G T C A C T G T C A G T A C G A T C G A G T C A T G C A G C T A T G C
p-value:1e-10
log p-value:-2.325e+01
Information Content per bp:1.794
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif3.1
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets64.7 +/- 25.8bp
Average Position of motif in Background40.4 +/- 27.2bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Zfx/MA0146.2/Jaspar

Match Rank:1
Score:0.68
Offset:0
Orientation:reverse strand
Alignment:SAGGCCCCGCAAC-
CAGGCCNNGGCCNN
 A T C G C T G A A T C G A C T G A T G C A T G C A G T C T G A C A C T G A G T C C T G A T C G A A G T C A C G T
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.65
Offset:3
Orientation:forward strand
Alignment:SAGGCCCCGCAAC--
---SCCTAGCAACAG
 A T C G C T G A A T C G A C T G A T G C A T G C A G T C T G A C A C T G A G T C C T G A T C G A A G T C A C G T A C G T
A C G T A C G T A C G T A T G C A G T C G T A C A G C T T C G A C T A G G A T C C T G A G T C A A G T C G C T A T C A G

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:3
Score:0.64
Offset:1
Orientation:forward strand
Alignment:SAGGCCCCGCAAC
-AGGCCTAG----
 A T C G C T G A A T C G A C T G A T G C A T G C A G T C T G A C A C T G A G T C C T G A T C G A A G T C
A C G T T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T

ZNF519(Zf)/HEK293-ZNF519.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:4
Score:0.64
Offset:0
Orientation:forward strand
Alignment:SAGGCCCCGCAAC
GAGSCCGAGC---
 A T C G C T G A A T C G A C T G A T G C A T G C A G T C T G A C A C T G A G T C C T G A T C G A A G T C
A C T G C G T A A C T G A T G C T G A C G A T C A T C G T G C A A C T G A G T C A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:5
Score:0.63
Offset:2
Orientation:forward strand
Alignment:SAGGCCCCGCAAC-
--GGCCCCGCCCCC
 A T C G C T G A A T C G A C T G A T G C A T G C A G T C T G A C A C T G A G T C C T G A T C G A A G T C A C G T
A C G T A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:6
Score:0.63
Offset:1
Orientation:forward strand
Alignment:SAGGCCCCGCAAC
-AGGCCTNG----
 A T C G C T G A A T C G A C T G A T G C A T G C A G T C T G A C A C T G A G T C C T G A T C G A A G T C
A C G T C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:7
Score:0.62
Offset:1
Orientation:forward strand
Alignment:SAGGCCCCGCAAC---
-CCGCATAGCAACGGA
 A T C G C T G A A T C G A C T G A T G C A T G C A G T C T G A C A C T G A G T C C T G A T C G A A G T C A C G T A C G T A C G T
A C G T A G T C A G T C T A C G A T G C G C T A G A C T T C G A C T A G G A T C C T G A T C G A A G T C T A C G T C A G C T G A

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:8
Score:0.60
Offset:-1
Orientation:forward strand
Alignment:-SAGGCCCCGCAAC-
TGTTKCCTAGCAACM
 A C G T A T C G C T G A A T C G A C T G A T G C A T G C A G T C T G A C A C T G A G T C C T G A T C G A A G T C A C G T
C A G T T C A G A G C T G A C T A C G T A G T C G A T C G A C T C T G A A C T G G A T C C G T A C T G A A G T C G T A C

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.60
Offset:-3
Orientation:forward strand
Alignment:---SAGGCCCCGCAAC-------
TGTGACCCTTAGCAACCGATTAA
 A C G T A C G T A C G T A T C G C T G A A T C G A C T G A T G C A T G C A G T C T G A C A C T G A G T C C T G A T C G A A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T
G A C T C A T G A G C T A T C G G T C A G A T C T G A C A T G C G A C T A G C T T C G A C T A G G A T C C T G A C G T A A G T C T A G C T C A G C G T A G C A T G C A T G C T A G C T A

PB0055.1_Rfx4_1/Jaspar

Match Rank:10
Score:0.57
Offset:1
Orientation:forward strand
Alignment:SAGGCCCCGCAAC---
-TACCATAGCAACGGT
 A T C G C T G A A T C G A C T G A T G C A T G C A G T C T G A C A C T G A G T C C T G A T C G A A G T C A C G T A C G T A C G T
A C G T A G C T G T C A T A G C A T G C G T C A A G C T T C G A C T A G G A T C C T G A C T G A A G T C T A C G T C A G C G A T