Information for 12-GTTTCTAGAC (Motif 14)

C T A G A C G T A C G T A C G T A G T C A G C T C G T A T A C G T G C A G T A C
Reverse Opposite:
A C T G A C G T A T G C C G A T C T G A A C T G G T C A C G T A C G T A G A T C
p-value:1e-10
log p-value:-2.445e+01
Information Content per bp:1.823
Number of Target Sequences with motif16.0
Percentage of Target Sequences with motif1.72%
Number of Background Sequences with motif78.4
Percentage of Background Sequences with motif0.18%
Average Position of motif in Targets40.4 +/- 27.0bp
Average Position of motif in Background46.9 +/- 36.5bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

SMAD3/MA0795.1/Jaspar

Match Rank:1
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:GTTTCTAGAC-
-TGTCTAGACG
 C T A G A C G T A C G T A C G T A G T C A G C T C G T A T A C G T G C A G T A C A C G T
A C G T C G A T C A T G C A G T T A G C A C G T T C G A A T C G G C T A G A T C C T A G

Rfx5(HTH)/GM12878-Rfx5-ChIP-Seq(GSE31477)/Homer

Match Rank:2
Score:0.71
Offset:-2
Orientation:reverse strand
Alignment:--GTTTCTAGAC
CTGTTGCTAGGS
 A C G T A C G T C T A G A C G T A C G T A C G T A G T C A G C T C G T A T A C G T G C A G T A C
A G T C C G A T A C T G A C G T G A C T C T A G A G T C A G C T C T G A C A T G C T A G T A C G

ZBTB12(Zf)/HEK293-ZBTB12.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:3
Score:0.68
Offset:-3
Orientation:reverse strand
Alignment:---GTTTCTAGAC--
BCNGGTTCTAGANCN
 A C G T A C G T A C G T C T A G A C G T A C G T A C G T A G T C A G C T C G T A T A C G T G C A G T A C A C G T A C G T
A G C T T G A C C T A G C A T G C T A G G A C T A C G T A G T C A G C T C T G A T A C G T C G A C G A T A G T C G A C T

PB0056.1_Rfxdc2_1/Jaspar

Match Rank:4
Score:0.67
Offset:-3
Orientation:reverse strand
Alignment:---GTTTCTAGAC--
NCCGTTGCTANGNGN
 A C G T A C G T A C G T C T A G A C G T A C G T A C G T A G T C A G C T C G T A T A C G T G C A G T A C A C G T A C G T
G A C T A G T C A T G C C T A G A C G T G A C T C T A G G A T C A G C T C T G A C A G T T A C G A T G C T C A G T C A G

PB0034.1_Irf4_1/Jaspar

Match Rank:5
Score:0.65
Offset:-4
Orientation:reverse strand
Alignment:----GTTTCTAGAC-
TNTGGTTTCGATACN
 A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T A G T C A G C T C G T A T A C G T G C A G T A C A C G T
G C A T A C G T G A C T C T A G A T C G C G A T C G A T A C G T A G T C C T A G C T G A G C A T G C T A G A T C A C T G

Rfx6(HTH)/Min6b1-Rfx6.HA-ChIP-Seq(GSE62844)/Homer

Match Rank:6
Score:0.64
Offset:-1
Orientation:reverse strand
Alignment:-GTTTCTAGAC----
KGTTGCTAGGMAACA
 A C G T C T A G A C G T A C G T A C G T A G T C A G C T C G T A T A C G T G C A G T A C A C G T A C G T A C G T A C G T
C A T G A C T G A G C T C G A T C T A G A G T C A G C T C T G A C T A G A C T G T G C A C T G A T C G A A G T C G T C A

PB0090.1_Zbtb12_1/Jaspar

Match Rank:7
Score:0.64
Offset:-4
Orientation:forward strand
Alignment:----GTTTCTAGAC---
CTAAGGTTCTAGATCAC
 A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T A G T C A G C T C G T A T A C G T G C A G T A C A C G T A C G T A C G T
A T G C A C G T G C T A T C G A A C T G C T A G C G A T C G A T A G T C A G C T T C G A C T A G T C G A G C A T A G T C T G C A A G T C

PB0055.1_Rfx4_1/Jaspar

Match Rank:8
Score:0.63
Offset:-3
Orientation:reverse strand
Alignment:---GTTTCTAGAC--
NNCGTTGCTATGGNN
 A C G T A C G T A C G T C T A G A C G T A C G T A C G T A G T C A G C T C G T A T A C G T G C A G T A C A C G T A C G T
G C T A A G T C A T G C C T A G A G C T G A C T C T A G A G T C A G C T C T G A C A G T T A C G A T C G C A G T T C G A

PB0054.1_Rfx3_1/Jaspar

Match Rank:9
Score:0.62
Offset:-7
Orientation:reverse strand
Alignment:-------GTTTCTAGAC------
NTNNNNNGTTGCTANGGNNCANA
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C G T A C G T A C G T A G T C A G C T C G T A T A C G T G C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
C G A T C G A T C G T A C G T A G C A T A G T C A T C G C T A G A C G T G A C T C T A G A G T C A G C T C T G A C T G A T A C G A C T G C T A G C A G T T A G C T C G A G T A C C T G A

PB0060.1_Smad3_1/Jaspar

Match Rank:10
Score:0.61
Offset:-1
Orientation:forward strand
Alignment:-GTTTCTAGAC------
CAAATCCAGACATCACA
 A C G T C T A G A C G T A C G T A C G T A G T C A G C T C G T A T A C G T G C A G T A C A C G T A C G T A C G T A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A