Information for 8-YYTTSCYACTTWKMSA (Motif 13)

A G T C A G T C A C G T A C G T A T C G A G T C A G T C C G T A A T G C A C G T A C G T C G A T A C G T G T C A A T G C C G T A
Reverse Opposite:
C G A T A T C G A C G T T G C A C G T A C G T A C G T A A T C G A C G T C T A G A C T G A T G C C G T A C G T A C T A G C T A G
p-value:1e-12
log p-value:-2.980e+01
Information Content per bp:1.797
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.65%
Number of Background Sequences with motif0.7
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets68.0 +/- 26.4bp
Average Position of motif in Background28.5 +/- 0.3bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0048.1_Nkx3-1_1/Jaspar

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:YYTTSCYACTTWKMSA-
CTTAACCACTTAAGGAT
 A G T C A G T C A C G T A C G T A T C G A G T C A G T C C G T A A T G C A C G T A C G T C G A T A C G T G T C A A T G C C G T A A C G T
G T A C G C A T C G A T T C G A C T G A T A G C A G T C C G T A G T A C A C G T A G C T C G T A C G T A T A C G A C T G T C G A A C G T

Nkx3-1/MA0124.2/Jaspar

Match Rank:2
Score:0.63
Offset:4
Orientation:forward strand
Alignment:YYTTSCYACTTWKMSA
----ACCACTTAA---
 A G T C A G T C A C G T A C G T A T C G A G T C A G T C C G T A A T G C A C G T A C G T C G A T A C G T G T C A A T G C C G T A
A C G T A C G T A C G T A C G T T C G A T A G C A G T C G C T A G T A C A G C T A G C T G C T A C T G A A C G T A C G T A C G T

PH0004.1_Nkx3-2/Jaspar

Match Rank:3
Score:0.63
Offset:0
Orientation:forward strand
Alignment:YYTTSCYACTTWKMSA-
CATAACCACTTAACAAC
 A G T C A G T C A C G T A C G T A T C G A G T C A G T C C G T A A T G C A C G T A C G T C G A T A C G T G T C A A T G C C G T A A C G T
T G A C G C T A C G A T T C G A G C T A T A G C A G T C C G T A G T A C A G C T A G C T G C T A C G T A T A G C T G C A G T C A G A T C

NKX3-2/MA0122.2/Jaspar

Match Rank:4
Score:0.63
Offset:4
Orientation:forward strand
Alignment:YYTTSCYACTTWKMSA
----ACCACTTAA---
 A G T C A G T C A C G T A C G T A T C G A G T C A G T C C G T A A T G C A C G T A C G T C G A T A C G T G T C A A T G C C G T A
A C G T A C G T A C G T A C G T T C G A T A G C G A T C G C T A G T A C A G C T G A C T G C T A C T G A A C G T A C G T A C G T

NKX2-3/MA0672.1/Jaspar

Match Rank:5
Score:0.60
Offset:4
Orientation:forward strand
Alignment:YYTTSCYACTTWKMSA
----ACCACTTGAA--
 A G T C A G T C A C G T A C G T A T C G A G T C A G T C C G T A A T G C A C G T A C G T C G A T A C G T G T C A A T G C C G T A
A C G T A C G T A C G T A C G T T G C A T A G C G A T C G C T A G T A C A C G T A G C T T C A G C G T A T C G A A C G T A C G T

PB0155.1_Osr2_2/Jaspar

Match Rank:6
Score:0.58
Offset:0
Orientation:forward strand
Alignment:YYTTSCYACTTWKMSA
ACTTGCTACCTACACC
 A G T C A G T C A C G T A C G T A T C G A G T C A G T C C G T A A T G C A C G T A C G T C G A T A C G T G T C A A T G C C G T A
C T G A G A T C G A C T G A C T T A C G A G T C G A C T G C T A G T A C G A T C G C A T T C G A G T A C C G T A A G C T T G A C

Tbet(T-box)/CD8-Tbet-ChIP-Seq(GSE33802)/Homer

Match Rank:7
Score:0.57
Offset:1
Orientation:reverse strand
Alignment:YYTTSCYACTTWKMSA
-KTTCACACCT-----
 A G T C A G T C A C G T A C G T A T C G A G T C A G T C C G T A A T G C A C G T A C G T C G A T A C G T G T C A A T G C C G T A
A C G T C A G T C A G T A C G T T A G C G C T A A G T C C T G A G T A C G A T C G C A T A C G T A C G T A C G T A C G T A C G T

Rbpj1(?)/Panc1-Rbpj1-ChIP-Seq(GSE47459)/Homer

Match Rank:8
Score:0.57
Offset:0
Orientation:forward strand
Alignment:YYTTSCYACTTWKMSA
HTTTCCCASG------
 A G T C A G T C A C G T A C G T A T C G A G T C A G T C C G T A A T G C A C G T A C G T C G A T A C G T G T C A A T G C C G T A
G A C T C A G T A G C T C G A T A G T C G A T C A G T C C G T A A T G C T C A G A C G T A C G T A C G T A C G T A C G T A C G T

ISL2/MA0914.1/Jaspar

Match Rank:9
Score:0.56
Offset:5
Orientation:forward strand
Alignment:YYTTSCYACTTWKMSA
-----GCACTTAA---
 A G T C A G T C A C G T A C G T A T C G A G T C A G T C C G T A A T G C A C G T A C G T C G A T A C G T G T C A A T G C C G T A
A C G T A C G T A C G T A C G T A C G T T A C G G A T C G C T A G T A C C G A T G A C T G C T A C T G A A C G T A C G T A C G T

NKX2-8/MA0673.1/Jaspar

Match Rank:10
Score:0.56
Offset:5
Orientation:forward strand
Alignment:YYTTSCYACTTWKMSA
-----CCACTTGAA--
 A G T C A G T C A C G T A C G T A T C G A G T C A G T C C G T A A T G C A C G T A C G T C G A T A C G T G T C A A T G C C G T A
A C G T A C G T A C G T A C G T A C G T T A G C G A T C G T C A G A T C A G C T G A C T T A C G G C T A T C G A A C G T A C G T