Information for 1-YBCYGATTGGYYV (Motif 1)

G A T C A G C T A T G C A G C T A T C G C G T A A C G T A C G T A C T G A C T G G A C T A G T C T A G C
Reverse Opposite:
A T C G T C A G C T G A A G T C A G T C C G T A C G T A A C G T T A G C T C G A T A C G T C G A C T A G
p-value:1e-297
log p-value:-6.845e+02
Information Content per bp:1.617
Number of Target Sequences with motif405.0
Percentage of Target Sequences with motif43.55%
Number of Background Sequences with motif1809.6
Percentage of Background Sequences with motif4.08%
Average Position of motif in Targets50.9 +/- 23.3bp
Average Position of motif in Background49.2 +/- 37.3bp
Strand Bias (log2 ratio + to - strand density)-0.0
Multiplicity (# of sites on avg that occur together)1.35
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.97
Offset:2
Orientation:reverse strand
Alignment:YBCYGATTGGYYV
--CCGATTGGCT-
 G A T C A G C T A T G C A G C T A T C G C G T A A C G T A C G T A C T G A C T G G A C T A G T C T A G C
A C G T A C G T A T G C A G T C A T C G C G T A A C G T A C G T A C T G A C T G G A T C A G C T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:2
Score:0.94
Offset:2
Orientation:reverse strand
Alignment:YBCYGATTGGYYV----
--CTGATTGGTCNATTT
 G A T C A G C T A T G C A G C T A T C G C G T A A C G T A C G T A C T G A C T G G A C T A G T C T A G C A C G T A C G T A C G T A C G T
A C G T A C G T A T G C A G C T A T C G C G T A A G C T A C G T A C T G A C T G G A C T A G T C T A G C T C G A C A G T C A G T A G C T

POL004.1_CCAAT-box/Jaspar

Match Rank:3
Score:0.91
Offset:3
Orientation:reverse strand
Alignment:YBCYGATTGGYYV--
---TGATTGGCTANN
 G A T C A G C T A T G C A G C T A T C G C G T A A C G T A C G T A C T G A C T G G A C T A G T C T A G C A C G T A C G T
A C G T A C G T A C G T A G C T A T C G G C T A G C A T A C G T C T A G T A C G G A T C G A C T C T G A T C A G C A G T

NFYA/MA0060.2/Jaspar

Match Rank:4
Score:0.88
Offset:-4
Orientation:forward strand
Alignment:----YBCYGATTGGYYV-
AGAGTGCTGATTGGTCCA
 A C G T A C G T A C G T A C G T G A T C A G C T A T G C A G C T A T C G C G T A A C G T A C G T A C T G A C T G G A C T A G T C T A G C A C G T
G C T A C A T G T G C A T A C G G A C T A C T G A G T C A G C T A T C G C T G A A G C T C G A T T C A G T A C G G A C T A G T C T A G C T C G A

Dux/MA0611.1/Jaspar

Match Rank:5
Score:0.76
Offset:2
Orientation:reverse strand
Alignment:YBCYGATTGGYYV
--TTGATTGN---
 G A T C A G C T A T G C A G C T A T C G C G T A A C G T A C G T A C T G A C T G G A C T A G T C T A G C
A C G T A C G T G A C T A C G T A C T G C G T A A C G T A C G T C T A G A T C G A C G T A C G T A C G T

NFIC/MA0161.1/Jaspar

Match Rank:6
Score:0.74
Offset:6
Orientation:forward strand
Alignment:YBCYGATTGGYYV
------TTGGCA-
 G A T C A G C T A T G C A G C T A T C G C G T A A C G T A C G T A C T G A C T G G A C T A G T C T A G C
A C G T A C G T A C G T A C G T A C G T A C G T G A C T C A G T T C A G C T A G G T A C C G T A A C G T

PH0089.1_Isx/Jaspar

Match Rank:7
Score:0.72
Offset:-2
Orientation:forward strand
Alignment:--YBCYGATTGGYYV-
ACTCCTAATTAGTCGT
 A C G T A C G T G A T C A G C T A T G C A G C T A T C G C G T A A C G T A C G T A C T G A C T G G A C T A G T C T A G C A C G T
G C T A T G A C A G C T T G A C G A T C A G C T G C T A C G T A C G A T C A G T C T G A C T A G A C G T A G T C T A C G C G A T

MSX2/MA0708.1/Jaspar

Match Rank:8
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:YBCYGATTGGYYV
--NTAATTGG---
 G A T C A G C T A T G C A G C T A T C G C G T A A C G T A C G T A C T G A C T G G A C T A G T C T A G C
A C G T A C G T A G C T C A G T T C G A C G T A A C G T C A G T C T A G A T C G A C G T A C G T A C G T

MSX1/MA0666.1/Jaspar

Match Rank:9
Score:0.71
Offset:2
Orientation:reverse strand
Alignment:YBCYGATTGGYYV
--NTAATTGG---
 G A T C A G C T A T G C A G C T A T C G C G T A A C G T A C G T A C T G A C T G G A C T A G T C T A G C
A C G T A C G T A G T C A C G T T G C A G T C A A C G T A C G T C T A G T A C G A C G T A C G T A C G T

EN2/MA0642.1/Jaspar

Match Rank:10
Score:0.70
Offset:1
Orientation:reverse strand
Alignment:YBCYGATTGGYYV
-GNTAATTGGN--
 G A T C A G C T A T G C A G C T A T C G C G T A A C G T A C G T A C T G A C T G G A C T A G T C T A G C
A C G T T A C G A T G C A G C T T C G A C G T A A C G T A C G T T C A G T A C G A T C G A C G T A C G T