Information for 11-AAACCHCHSY (Motif 9)

G C T A G T C A T C G A G A T C T G A C G C T A A G T C G C A T A T G C G A C T
Reverse Opposite:
C T G A T A C G C G T A T C A G C G A T A C T G C T A G A G C T C A G T C G A T
p-value:1e-12
log p-value:-2.791e+01
Information Content per bp:1.503
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif5.72%
Number of Background Sequences with motif810.4
Percentage of Background Sequences with motif1.69%
Average Position of motif in Targets50.6 +/- 28.3bp
Average Position of motif in Background48.2 +/- 30.8bp
Strand Bias (log2 ratio + to - strand density)-0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.64
Offset:0
Orientation:forward strand
Alignment:AAACCHCHSY
AAACCACANN
 G C T A G T C A T C G A G A T C T G A C G C T A A G T C G C A T A T G C G A C T
G C T A C T G A T C G A A G T C A G T C C T G A A G T C G T C A C T G A T G C A

Gfi1b/MA0483.1/Jaspar

Match Rank:2
Score:0.63
Offset:0
Orientation:forward strand
Alignment:AAACCHCHSY-
AAATCACAGCA
 G C T A G T C A T C G A G A T C T G A C G C T A A G T C G C A T A T G C G A C T A C G T
T G C A C G T A C T G A A G C T A G T C G C T A T A G C C G T A C T A G G A T C G C T A

Gfi1/MA0038.1/Jaspar

Match Rank:3
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAACCHCHSY
CAAATCACTG-
 A C G T G C T A G T C A T C G A G A T C T G A C G C T A A G T C G C A T A T G C G A C T
A G T C T G C A C G T A C G T A C A G T G T A C G C T A T A G C G C A T T A C G A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:4
Score:0.62
Offset:-1
Orientation:forward strand
Alignment:-AAACCHCHSY
NAAACCACAG-
 A C G T G C T A G T C A T C G A G A T C T G A C G C T A A G T C G C A T A T G C G A C T
T A G C G C T A T C G A C T G A A G T C A G T C C T G A A G T C C G T A C T A G A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:5
Score:0.60
Offset:0
Orientation:reverse strand
Alignment:AAACCHCHSY
AAACCACAGC
 G C T A G T C A T C G A G A T C T G A C G C T A A G T C G C A T A T G C G A C T
G C T A T C G A T G C A T G A C G T A C T G C A A G T C C T G A C T A G T G A C

FOXG1/MA0613.1/Jaspar

Match Rank:6
Score:0.59
Offset:-2
Orientation:forward strand
Alignment:--AAACCHCHSY
GTAAACAA----
 A C G T A C G T G C T A G T C A T C G A G A T C T G A C G C T A A G T C G C A T A T G C G A C T
C T A G A C G T C G T A C G T A C G T A A G T C C G T A G C T A A C G T A C G T A C G T A C G T

IRF4(IRF)/GM12878-IRF4-ChIP-Seq(GSE32465)/Homer

Match Rank:7
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----AAACCHCHSY
ACTGAAACCA----
 A C G T A C G T A C G T A C G T G C T A G T C A T C G A G A T C T G A C G C T A A G T C G C A T A T G C G A C T
G C T A T A G C A G C T A T C G G T C A C G T A G C T A A T G C G A T C C T G A A C G T A C G T A C G T A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:8
Score:0.59
Offset:0
Orientation:reverse strand
Alignment:AAACCHCHSY-
AAACCACAGAN
 G C T A G T C A T C G A G A T C T G A C G C T A A G T C G C A T A T G C G A C T A C G T
G C T A C T G A T C G A T G A C G T A C C T G A T A G C G C T A T C A G T C G A T G A C

FOXP3/MA0850.1/Jaspar

Match Rank:9
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAACCHCHSY
GTAAACA-----
 A C G T A C G T G C T A G T C A T C G A G A T C T G A C G C T A A G T C G C A T A T G C G A C T
C T A G G A C T C G T A C T G A T C G A A G T C C T G A A C G T A C G T A C G T A C G T A C G T

FOXD2/MA0847.1/Jaspar

Match Rank:10
Score:0.58
Offset:-2
Orientation:forward strand
Alignment:--AAACCHCHSY
GTAAACA-----
 A C G T A C G T G C T A G T C A T C G A G A T C T G A C G C T A A G T C G C A T A T G C G A C T
T C A G G A C T G T C A G T C A C G T A A G T C C T G A A C G T A C G T A C G T A C G T A C G T