Information for 2-RADGTGAAASTGAAAC (Motif 6)

C T A G G C T A C G A T A C T G C G A T A C T G C T G A C T G A C G T A A T C G C G A T C T A G C G T A T G C A G T C A G A T C
Reverse Opposite:
C T A G A C G T A C G T A C G T A G T C C G T A T A G C C G A T A G C T A G C T A G T C G C T A T G A C G C T A C G A T G A T C
p-value:1e-18
log p-value:-4.305e+01
Information Content per bp:1.661
Number of Target Sequences with motif29.0
Percentage of Target Sequences with motif3.46%
Number of Background Sequences with motif169.9
Percentage of Background Sequences with motif0.35%
Average Position of motif in Targets40.8 +/- 19.6bp
Average Position of motif in Background49.7 +/- 30.0bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

IRF1/MA0050.2/Jaspar

Match Rank:1
Score:0.84
Offset:0
Orientation:reverse strand
Alignment:RADGTGAAASTGAAAC-----
AAANNGAAAGTGAAAGTAAAN
 C T A G G C T A C G A T A C T G C G A T A C T G C T G A C T G A C G T A A T C G C G A T C T A G C G T A T G C A G T C A G A T C A C G T A C G T A C G T A C G T A C G T
C T G A C G T A C T G A T C A G G C A T T C A G C T G A C T G A C G T A T A C G G A C T C T A G T C G A C T G A C G T A T A C G G A C T T C G A T C G A C T G A C T G A

ISRE(IRF)/ThioMac-LPS-Expression(GSE23622)/Homer

Match Rank:2
Score:0.83
Offset:5
Orientation:reverse strand
Alignment:RADGTGAAASTGAAAC-
-----GAAACTGAAACT
 C T A G G C T A C G A T A C T G C G A T A C T G C T G A C T G A C G T A A T C G C G A T C T A G C G T A T G C A G T C A G A T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T G A G T C A C G T A A T G C G A C T A T C G G T C A C T G A C T G A T A G C G A C T

IRF1(IRF)/PBMC-IRF1-ChIP-Seq(GSE43036)/Homer

Match Rank:3
Score:0.83
Offset:5
Orientation:forward strand
Alignment:RADGTGAAASTGAAAC-
-----GAAAGTGAAAGT
 C T A G G C T A C G A T A C T G C G A T A C T G C T G A C T G A C G T A A T C G C G A T C T A G C G T A T G C A G T C A G A T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G C T G A C G T A C G T A T A C G G C A T C T A G C T G A C G T A C G T A T A C G G A C T

IRF3(IRF)/BMDM-Irf3-ChIP-Seq(GSE67343)/Homer

Match Rank:4
Score:0.80
Offset:5
Orientation:reverse strand
Alignment:RADGTGAAASTGAAAC-
-----GAAAMTGAAACT
 C T A G G C T A C G A T A C T G C G A T A C T G C T G A C T G A C G T A A T C G C G A T C T A G C G T A T G C A G T C A G A T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A C T G A G T C A T G A C A G C T T C A G T C G A C T G A C G T A A T G C G A C T

IRF8(IRF)/BMDM-IRF8-ChIP-Seq(GSE77884)/Homer

Match Rank:5
Score:0.80
Offset:5
Orientation:forward strand
Alignment:RADGTGAAASTGAAAC-
-----GRAASTGAAAST
 C T A G G C T A C G A T A C T G C G A T A C T G C T G A C T G A C G T A A T C G C G A T C T A G C G T A T G C A G T C A G A T C A C G T
A C G T A C G T A C G T A C G T A C G T T C A G T C A G G C T A C G T A T A C G G A C T T C A G T C G A C T G A C G T A T A C G G A C T

IRF2(IRF)/Erythroblas-IRF2-ChIP-Seq(GSE36985)/Homer

Match Rank:6
Score:0.79
Offset:5
Orientation:forward strand
Alignment:RADGTGAAASTGAAAC-
-----GAAASYGAAASY
 C T A G G C T A C G A T A C T G C G A T A C T G C T G A C T G A C G T A A T C G C G A T C T A G C G T A T G C A G T C A G A T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G T C G A C T G A C G T A T A C G G A C T T C A G T C G A G T C A T G C A T A C G A G C T

STAT1::STAT2/MA0517.1/Jaspar

Match Rank:7
Score:0.76
Offset:4
Orientation:reverse strand
Alignment:RADGTGAAASTGAAAC---
----GGAAANTGAAACTNA
 C T A G G C T A C G A T A C T G C G A T A C T G C T G A C T G A C G T A A T C G C G A T C T A G C G T A T G C A G T C A G A T C A C G T A C G T A C G T
A C G T A C G T A C G T A C G T T C A G C T A G C T G A C G T A T C G A T G C A G A C T C T A G T C G A C G T A C T G A A T G C G A C T C T A G G T C A

PU.1:IRF8(ETS:IRF)/pDC-Irf8-ChIP-Seq(GSE66899)/Homer

Match Rank:8
Score:0.74
Offset:5
Orientation:forward strand
Alignment:RADGTGAAASTGAAAC-
-----GGAAGTGAAAST
 C T A G G C T A C G A T A C T G C G A T A C T G C T G A C T G A C G T A A T C G C G A T C T A G C G T A T G C A G T C A G A T C A C G T
A C G T A C G T A C G T A C G T A C G T C T A G C T A G C G T A C G T A T A C G C G A T C T A G C T G A C T G A C G T A T A C G G A C T

PRDM1/MA0508.1/Jaspar

Match Rank:9
Score:0.74
Offset:-2
Orientation:forward strand
Alignment:--RADGTGAAASTGAAAC
AGAAAGTGAAAGTGA---
 A C G T A C G T C T A G G C T A C G A T A C T G C G A T A C T G C T G A C T G A C G T A A T C G C G A T C T A G C G T A T G C A G T C A G A T C
C G T A C T A G C T G A T C G A C T G A C T A G C A G T C T A G C G T A C T G A C G T A T C A G A C G T C T A G C T G A A C G T A C G T A C G T

IRF2/MA0051.1/Jaspar

Match Rank:10
Score:0.72
Offset:4
Orientation:forward strand
Alignment:RADGTGAAASTGAAAC------
----GGAAAGCGAAACCAAAAC
 C T A G G C T A C G A T A C T G C G A T A C T G C T G A C T G A C G T A A T C G C G A T C T A G C G T A T G C A G T C A G A T C A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A T C G C T A G C G T A C G T A C G T A C T A G A G C T A C T G C G T A C G T A C G T A A T C G A G T C C T G A C G T A C G T A G C T A G T A C