Information for 6-HTGTGGTTTN (Motif 3)

G C A T A C G T A C T G A G C T C T A G A T C G A G C T A G C T G A C T A T C G
Reverse Opposite:
T A G C C T G A C T G A T C G A A T G C A G T C C T G A G T A C G T C A C G T A
p-value:1e-31
log p-value:-7.321e+01
Information Content per bp:1.628
Number of Target Sequences with motif100.0
Percentage of Target Sequences with motif11.92%
Number of Background Sequences with motif1372.6
Percentage of Background Sequences with motif2.86%
Average Position of motif in Targets53.5 +/- 25.0bp
Average Position of motif in Background49.2 +/- 30.7bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.96
Offset:-1
Orientation:reverse strand
Alignment:-HTGTGGTTTN
NNTGTGGTTT-
 A C G T G C A T A C G T A C T G A G C T C T A G A T C G A G C T A G C T G A C T A T C G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.95
Offset:0
Orientation:reverse strand
Alignment:HTGTGGTTTN
CTGTGGTTTN
 G C A T A C G T A C T G A G C T C T A G A T C G A G C T A G C T G A C T A T C G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.94
Offset:-2
Orientation:forward strand
Alignment:--HTGTGGTTTN
GTCTGTGGTTT-
 A C G T A C G T G C A T A C G T A C T G A G C T C T A G A T C G A G C T A G C T G A C T A T C G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:4
Score:0.93
Offset:-2
Orientation:reverse strand
Alignment:--HTGTGGTTTN
NNHTGTGGTTWN
 A C G T A C G T G C A T A C G T A C T G A G C T C T A G A T C G A G C T A G C T G A C T A T C G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G

RUNX3/MA0684.1/Jaspar

Match Rank:5
Score:0.92
Offset:-1
Orientation:reverse strand
Alignment:-HTGTGGTTTN
TTTGCGGTTT-
 A C G T G C A T A C G T A C T G A G C T C T A G A T C G A G C T A G C T G A C T A T C G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:6
Score:0.91
Offset:0
Orientation:reverse strand
Alignment:HTGTGGTTTN
TTGCGGTTT-
 G C A T A C G T A C T G A G C T C T A G A T C G A G C T A G C T G A C T A T C G
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:7
Score:0.91
Offset:-1
Orientation:forward strand
Alignment:-HTGTGGTTTN
GCTGTGGTTT-
 A C G T G C A T A C G T A C T G A G C T C T A G A T C G A G C T A G C T G A C T A T C G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T

ZNF354C/MA0130.1/Jaspar

Match Rank:8
Score:0.73
Offset:2
Orientation:reverse strand
Alignment:HTGTGGTTTN
--GTGGAT--
 G C A T A C G T A C T G A G C T C T A G A T C G A G C T A G C T G A C T A T C G
A C G T A C G T A T C G A C G T A C T G A C T G C G T A A C G T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:9
Score:0.72
Offset:1
Orientation:reverse strand
Alignment:HTGTGGTTTN--
-TGTGGATTNNN
 G C A T A C G T A C T G A G C T C T A G A T C G A G C T A G C T G A C T A T C G A C G T A C G T
A C G T C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:10
Score:0.71
Offset:-1
Orientation:forward strand
Alignment:-HTGTGGTTTN-
NNTGTGGATTSS
 A C G T G C A T A C G T A C T G A G C T C T A G A T C G A G C T A G C T G A C T A T C G A C G T
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G