Information for 17-ATATATATATATA (Motif 25)

C T G A A G C T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C T G A A G C T C T G A
Reverse Opposite:
A G C T C T G A A G C T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C T G A A G C T
p-value:1e-1
log p-value:-4.054e+00
Information Content per bp:1.903
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif0.8
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets27.0 +/- 0.0bp
Average Position of motif in Background39.3 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0080.1_Tbp_1/Jaspar

Match Rank:1
Score:0.81
Offset:-1
Orientation:reverse strand
Alignment:-ATATATATATATA--
NANTTATATATAANGN
 A C G T C T G A A G C T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C T G A A G C T C T G A A C G T A C G T
A G C T G T C A C A G T C G A T G C A T C G T A G C A T C G T A C G A T C G T A C G A T C G T A G C T A C G T A C T A G C T G A

PB0198.1_Zfp128_2/Jaspar

Match Rank:2
Score:0.79
Offset:-1
Orientation:reverse strand
Alignment:-ATATATATATATA
NNTATANATATACN
 A C G T C T G A A G C T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C T G A A G C T C T G A
A T C G A C T G G C A T C T G A G C A T C T G A G C A T C T G A G A C T C G T A G A C T C G T A G T A C G T C A

OCT:OCT(POU,Homeobox)/NPC-OCT6-ChIP-Seq(GSE43916)/Homer

Match Rank:3
Score:0.78
Offset:0
Orientation:reverse strand
Alignment:ATATATATATATA--
AYATGYATATGCATR
 C T G A A G C T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C T G A A G C T C T G A A C G T A C G T
C T G A G A C T C T G A G A C T C T A G G A T C C T G A G A C T C T G A G A C T C T A G G A T C C T G A G C A T C T A G

PB0163.1_Six6_2/Jaspar

Match Rank:4
Score:0.70
Offset:-2
Orientation:reverse strand
Alignment:--ATATATATATATA--
ANNNGGATATATCCNNN
 A C G T A C G T C T G A A G C T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C T G A A G C T C T G A A C G T A C G T
G T C A C T A G C T A G A G T C T C A G C A T G T C G A A C G T T G C A A G C T C T G A A G C T T G A C A T G C T A G C G C T A A C G T

FOXB1/MA0845.1/Jaspar

Match Rank:5
Score:0.63
Offset:2
Orientation:reverse strand
Alignment:ATATATATATATA
--ATATTTACATA
 C T G A A G C T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C T G A A G C T C T G A
A C G T A C G T C G T A G A C T T C G A C G A T C G A T A C G T C T G A G A T C G C T A G A C T C G T A

FOXC1/MA0032.2/Jaspar

Match Rank:6
Score:0.60
Offset:2
Orientation:reverse strand
Alignment:ATATATATATATA
--ATATTTACATA
 C T G A A G C T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C T G A A G C T C T G A
A C G T A C G T C G T A G A C T T C G A G A C T C A G T C A G T C G T A A G T C G C T A G A C T C G T A

POL012.1_TATA-Box/Jaspar

Match Rank:7
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----ATATATATATATA
NNNNNNCTTTTATAN---
 A C G T A C G T A C G T A C G T A C G T C T G A A G C T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C T G A A G C T C T G A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

TBP/MA0108.2/Jaspar

Match Rank:8
Score:0.60
Offset:-5
Orientation:reverse strand
Alignment:-----ATATATATATATA
NNNNNNCTTTTATAN---
 A C G T A C G T A C G T A C G T A C G T C T G A A G C T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C T G A A G C T C T G A
A T G C T A G C A T G C A T G C A T C G A T G C A G T C G C A T G A C T C G A T G C A T C T G A G C A T T C G A A T G C A C G T A C G T A C G T

Pit1(Homeobox)/GCrat-Pit1-ChIP-Seq(GSE58009)/Homer

Match Rank:9
Score:0.58
Offset:0
Orientation:reverse strand
Alignment:ATATATATATATA
GHATATKCAT---
 C T G A A G C T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C T G A A G C T C T G A
C T A G G T A C C G T A G A C T C T G A C G A T C A T G G A T C C G T A C G A T A C G T A C G T A C G T

OCT:OCT(POU,Homeobox)/NPC-Brn1-ChIP-Seq(GSE35496)/Homer

Match Rank:10
Score:0.57
Offset:0
Orientation:forward strand
Alignment:ATATATATATATA--
ATGAATATTCATGAG
 C T G A A G C T C G T A A C G T C G T A A C G T C G T A A C G T C G T A A C G T C T G A A G C T C T G A A C G T A C G T
G C T A A C G T C T A G G T C A C G T A A C G T C G T A C G A T C A G T A G T C C G T A A C G T C T A G C T G A A T C G