Information for 15-CACAGTTCAA (Motif 22)

A G T C C G T A A G T C C G T A A C T G A C G T A C G T A G T C C G T A C G T A
Reverse Opposite:
A C G T A C G T A C T G C G T A C G T A A G T C A C G T A C T G A C G T A C T G
p-value:1e-7
log p-value:-1.782e+01
Information Content per bp:1.530
Number of Target Sequences with motif6.0
Percentage of Target Sequences with motif0.72%
Number of Background Sequences with motif9.1
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets56.0 +/- 24.5bp
Average Position of motif in Background49.6 +/- 31.8bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

HNF4a(NR),DR1/HepG2-HNF4a-ChIP-Seq(GSE25021)/Homer

Match Rank:1
Score:0.68
Offset:-7
Orientation:forward strand
Alignment:-------CACAGTTCAA
CANAGNNCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T A C G T A G T C C G T A C G T A
G T A C G C T A T C A G C T G A C T A G C A T G A G C T G A T C T G C A T C G A C T G A A C T G C A G T A G T C G A T C G C T A A C G T

HNF4G/MA0484.1/Jaspar

Match Rank:2
Score:0.67
Offset:-6
Orientation:forward strand
Alignment:------CACAGTTCAA
AGAGTCCAAAGTCCA-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T A C G T A G T C C G T A C G T A
C G T A T C A G C T G A C T A G C A G T A G T C A G T C T G C A T C G A C T G A C A T G C A G T A G T C G A T C G C T A A C G T

Erra(NR)/HepG2-Erra-ChIP-Seq(GSE31477)/Homer

Match Rank:3
Score:0.65
Offset:0
Orientation:forward strand
Alignment:CACAGTTCAA
CAAAGGTCAG
 A G T C C G T A A G T C C G T A A C T G A C G T A C G T A G T C C G T A C G T A
A G T C T G C A T C G A C T G A A C T G C A T G A C G T A T G C G T C A T A C G

PB0134.1_Hnf4a_2/Jaspar

Match Rank:4
Score:0.63
Offset:-3
Orientation:forward strand
Alignment:---CACAGTTCAA---
GGCAAAAGTCCAATAA
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T G A T C G T A C C G T A C T G A C T G A A C T G A C G T G T A C A G T C C T G A G T C A C G A T G T C A G C A T

RAR:RXR(NR),DR5/ES-RAR-ChIP-Seq(GSE56893)/Homer

Match Rank:5
Score:0.63
Offset:3
Orientation:forward strand
Alignment:CACAGTTCAA-----
---AGGTCAAGGTCA
 A G T C C G T A A G T C C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T T C G A A C T G C A T G A G C T A G T C C G T A C T G A C T A G A C T G C G A T A T G C C T G A

PB0053.1_Rara_1/Jaspar

Match Rank:6
Score:0.62
Offset:-3
Orientation:forward strand
Alignment:---CACAGTTCAA---
TCTCAAAGGTCACCTG
 A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
C A G T G T A C A G C T G T A C G C T A C T G A T C G A A C T G A C T G A C G T A G T C C T G A G A T C T A G C G A C T C A T G

NR2F1/MA0017.2/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CACAGTTCAA---
CAAAGGTCAAGGG
 A G T C C G T A A G T C C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
G T A C G C T A C T G A C T G A A T C G A C T G A C G T A G T C C T G A G T C A T C A G T C A G C T A G

Hnf4a/MA0114.3/Jaspar

Match Rank:8
Score:0.61
Offset:-5
Orientation:forward strand
Alignment:-----CACAGTTCAA-
GGGGTCAAAGTCCAAT
 A C G T A C G T A C G T A C G T A C G T A G T C C G T A A G T C C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C G T
T C A G T C A G C T A G C A T G C A G T A G T C T C G A C T G A C T G A A C T G A C G T A G T C A G T C C T G A T C G A G A C T

POL009.1_DCE_S_II/Jaspar

Match Rank:9
Score:0.61
Offset:0
Orientation:reverse strand
Alignment:CACAGTTCAA
CACAGN----
 A G T C C G T A A G T C C G T A A C T G A C G T A C G T A G T C C G T A C G T A
T A G C C T G A T A G C G T C A A C T G A T G C A C G T A C G T A C G T A C G T

Tcf3(HMG)/mES-Tcf3-ChIP-Seq(GSE11724)/Homer

Match Rank:10
Score:0.61
Offset:3
Orientation:forward strand
Alignment:CACAGTTCAA---
---ACATCAAAGG
 A G T C C G T A A G T C C G T A A C T G A C G T A C G T A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T C T G A A T G C G C T A C G A T A T G C C G T A C G T A C G T A C T A G T A C G