Information for 25-TAATTAATTAATT (Motif 28)

C G A T C T G A C G T A C G A T C G A T T C G A C T G A G A C T A C G T C G T A G T C A G A C T A G C T
Reverse Opposite:
C T G A C G T A A C G T C G A T T C G A C G T A A G C T A C G T C G T A C G T A G A C T A G C T C G T A
p-value:1e-5
log p-value:-1.159e+01
Information Content per bp:1.769
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.58%
Number of Background Sequences with motif15.7
Percentage of Background Sequences with motif0.03%
Average Position of motif in Targets68.9 +/- 19.8bp
Average Position of motif in Background52.7 +/- 24.3bp
Strand Bias (log2 ratio + to - strand density)0.3
Multiplicity (# of sites on avg that occur together)1.20
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PH0146.1_Pou3f1/Jaspar

Match Rank:1
Score:0.91
Offset:-3
Orientation:forward strand
Alignment:---TAATTAATTAATT-
AATTAATTAATTAATTC
 A C G T A C G T A C G T C G A T C T G A C G T A C G A T C G A T T C G A C T G A G A C T A C G T C G T A G T C A G A C T A G C T A C G T
C T G A T G C A A G C T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G T C A T C G A A C G T C G A T G T A C

PH0149.1_Pou3f4/Jaspar

Match Rank:2
Score:0.89
Offset:-3
Orientation:forward strand
Alignment:---TAATTAATTAATT-
AATTAATTAATTAATTC
 A C G T A C G T A C G T C G A T C T G A C G T A C G A T C G A T T C G A C T G A G A C T A C G T C G T A G T C A G A C T A G C T A C G T
C T G A T G C A G C A T C A G T G T C A G C T A C G A T C G A T G C T A C G T A C A G T C A G T G C T A C T G A C A G T C G A T A G T C

PH0093.1_Lhx3/Jaspar

Match Rank:3
Score:0.87
Offset:-2
Orientation:reverse strand
Alignment:--TAATTAATTAATT--
NNTATTTAATTAATTNN
 A C G T A C G T C G A T C T G A C G T A C G A T C G A T T C G A C T G A G A C T A C G T C G T A G T C A G A C T A G C T A C G T A C G T
T G C A C A G T C A G T G C T A G C A T G A C T G A C T C T G A C G T A C G A T A G C T C T G A C T G A A G C T C A G T G C A T A T G C

PH0142.1_Pou1f1/Jaspar

Match Rank:4
Score:0.87
Offset:-3
Orientation:forward strand
Alignment:---TAATTAATTAATT-
GATTAATTAATTAAGTC
 A C G T A C G T A C G T C G A T C T G A C G T A C G A T C G A T T C G A C T G A G A C T A C G T C G T A G T C A G A C T A G C T A C G T
C T A G T C G A C G A T C A G T G T C A G C T A C G A T C G A T C G T A C G T A C G A T C A G T G C T A C G T A C A T G C G A T A G T C

Lhx3/MA0135.1/Jaspar

Match Rank:5
Score:0.85
Offset:0
Orientation:forward strand
Alignment:TAATTAATTAATT
AAATTAATTAATC
 C G A T C T G A C G T A C G A T C G A T T C G A C T G A G A C T A C G T C G T A G T C A G A C T A G C T
C G T A T C G A C G T A A C G T A C G T C G T A C G T A G A C T A G C T G C T A C G T A G A C T A G T C

PH0095.1_Lhx5/Jaspar

Match Rank:6
Score:0.85
Offset:-2
Orientation:reverse strand
Alignment:--TAATTAATTAATT--
ANNATTTAATTAATTNN
 A C G T A C G T C G A T C T G A C G T A C G A T C G A T T C G A C T G A G A C T A C G T C G T A G T C A G A C T A G C T A C G T A C G T
T C G A C A T G C A G T C G T A C G A T G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T C A G T G A T C A T C G

PH0019.1_Dbx2/Jaspar

Match Rank:7
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--TAATTAATTAATT-
TTTAATTAATTAATTC
 A C G T A C G T C G A T C T G A C G T A C G A T C G A T T C G A C T G A G A C T A C G T C G T A G T C A G A C T A G C T A C G T
A C G T C A G T G A C T G T C A C G T A G C A T G A C T C G T A C G T A C G A T C A G T C T G A C G T A A C G T G C A T G T A C

PH0101.1_Lmx1b/Jaspar

Match Rank:8
Score:0.83
Offset:-2
Orientation:forward strand
Alignment:--TAATTAATTAATT--
AGTTTTTAATTAATTTG
 A C G T A C G T C G A T C T G A C G T A C G A T C G A T T C G A C T G A G A C T A C G T C G T A G T C A G A C T A G C T A C G T A C G T
T C G A C T A G C G A T C G A T G C A T A G C T G A C T G C T A C G T A G C A T C G A T C G T A C T G A C G A T C G A T G A C T A C T G

PH0091.1_Lhx1/Jaspar

Match Rank:9
Score:0.83
Offset:-2
Orientation:reverse strand
Alignment:--TAATTAATTAATT--
NNTTATTAATTAATNCN
 A C G T A C G T C G A T C T G A C G T A C G A T C G A T T C G A C T G A G A C T A C G T C G T A G T C A G A C T A G C T A C G T A C G T
T G A C C T G A C G A T C G A T C G T A G A C T G A C T T C G A C G T A C G A T A C G T C T G A C T G A G A C T G C A T A G T C A C T G

PH0070.1_Hoxc5/Jaspar

Match Rank:10
Score:0.82
Offset:-2
Orientation:reverse strand
Alignment:--TAATTAATTAATT--
NNTNATTAATTAATTCG
 A C G T A C G T C G A T C T G A C G T A C G A T C G A T T C G A C T G A G A C T A C G T C G T A G T C A G A C T A G C T A C G T A C G T
C G T A C T A G A C G T C G T A C T G A A G C T G A C T G T C A C G T A G C A T C A G T C T G A T C G A A G C T C A G T A T G C A T C G