Information for 20-GCGCGGAGCCAAT (Motif 23)

A C T G A G T C A C T G A G T C A T C G A T C G C T G A A C T G A G T C A G T C C G T A C G T A A C G T
Reverse Opposite:
C G T A A C G T A C G T A C T G A C T G A G T C A G C T A T G C A T G C A C T G A G T C A C T G A G T C
p-value:1e-8
log p-value:-1.929e+01
Information Content per bp:1.924
Number of Target Sequences with motif4.0
Percentage of Target Sequences with motif0.47%
Number of Background Sequences with motif1.2
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets52.5 +/- 30.3bp
Average Position of motif in Background87.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)0.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

NFY(CCAAT)/Promoter/Homer

Match Rank:1
Score:0.68
Offset:6
Orientation:forward strand
Alignment:GCGCGGAGCCAAT---
------AGCCAATCGG
 A C T G A G T C A C T G A G T C A T C G A T C G C T G A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T T C G A C T A G A G T C A G T C C G T A C G T A A C G T T A G C T C A G T A C G

POL004.1_CCAAT-box/Jaspar

Match Rank:2
Score:0.66
Offset:3
Orientation:forward strand
Alignment:GCGCGGAGCCAAT--
---ACTAGCCAATCA
 A C T G A G T C A C T G A G T C A T C G A T C G C T G A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T G T C A A G T C G A C T C T G A C T A G A G T C A G T C C G T A C G T A C G A T T A G C T C G A

NFIC::TLX1/MA0119.1/Jaspar

Match Rank:3
Score:0.65
Offset:-2
Orientation:forward strand
Alignment:--GCGCGGAGCCAAT
TGGCACCATGCCAA-
 A C G T A C G T A C T G A G T C A C T G A G T C A T C G A T C G C T G A A C T G A G T C A G T C C G T A C G T A A C G T
A C G T A C T G A C T G A G T C G C T A T A G C A T G C C T G A G C A T A C T G A G T C A G T C C G T A C G T A A C G T

NFIC/MA0161.1/Jaspar

Match Rank:4
Score:0.62
Offset:6
Orientation:reverse strand
Alignment:GCGCGGAGCCAAT
------TGCCAA-
 A C T G A G T C A C T G A G T C A T C G A T C G C T G A A C T G A G T C A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T A C G T A C G T G C A T C A T G G A T C A G T C G T C A C T G A A C G T

NFIX/MA0671.1/Jaspar

Match Rank:5
Score:0.61
Offset:4
Orientation:forward strand
Alignment:GCGCGGAGCCAAT
----CGTGCCAAG
 A C T G A G T C A C T G A G T C A T C G A T C G C T G A A C T G A G T C A G T C C G T A C G T A A C G T
A C G T A C G T A C G T A C G T T A G C C A T G G C A T A C T G A T G C A G T C T G C A C T G A T A C G

Sp1(Zf)/Promoter/Homer

Match Rank:6
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--GCGCGGAGCCAAT
GGGGGCGGGGCC---
 A C G T A C G T A C T G A G T C A C T G A G T C A T C G A T C G C T G A A C T G A G T C A G T C C G T A C G T A A C G T
T C A G C A T G C T A G A C T G A C T G A G T C A C T G A C T G C T A G T A C G A G T C A T G C A C G T A C G T A C G T

NFYB/MA0502.1/Jaspar

Match Rank:7
Score:0.59
Offset:1
Orientation:forward strand
Alignment:GCGCGGAGCCAAT---
-AAATGGACCAATCAG
 A C T G A G T C A C T G A G T C A T C G A T C G C T G A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
A C G T T C G A G T C A G T C A A G C T A T C G T C A G C T G A A G T C A G T C C G T A C T G A A C G T T A G C T C G A T A C G

NF1(CTF)/LNCAP-NF1-ChIP-Seq(Unpublished)/Homer

Match Rank:8
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----GCGCGGAGCCAAT
CTTGGCANNNTGCCAA-
 A C G T A C G T A C G T A C G T A C T G A G T C A C T G A G T C A T C G A T C G C T G A A C T G A G T C A G T C C G T A C G T A A C G T
A G T C G A C T C A G T A C T G C T A G T G A C G C T A A T G C G C A T A T C G C G A T A C T G G A T C G T A C G T C A C T G A A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:9
Score:0.59
Offset:-1
Orientation:forward strand
Alignment:-GCGCGGAGCCAAT---
CCTTCGGCGCCAAAAGG
 A C G T A C T G A G T C A C T G A G T C A T C G A T C G C T G A A C T G A G T C A G T C C G T A C G T A A C G T A C G T A C G T A C G T
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G

Sp5(Zf)/mES-Sp5.Flag-ChIP-Seq(GSE72989)/Homer

Match Rank:10
Score:0.58
Offset:-3
Orientation:forward strand
Alignment:---GCGCGGAGCCAAT
RGKGGGCGGAGC----
 A C G T A C G T A C G T A C T G A G T C A C T G A G T C A T C G A T C G C T G A A C T G A G T C A G T C C G T A C G T A A C G T
C T G A T C A G C A G T C T A G A C T G C T A G G A T C A T C G A C T G C T G A T C A G G A T C A C G T A C G T A C G T A C G T