Information for 9-TGTGGTTTAG (Motif 8)

A G C T T C A G A C G T C A T G A T C G G A C T A C G T C G A T C T G A T C A G
Reverse Opposite:
A G T C A G C T C G T A G T C A C T G A A T G C G T A C G T C A A G T C C T G A
p-value:1e-12
log p-value:-2.853e+01
Information Content per bp:1.730
Number of Target Sequences with motif38.0
Percentage of Target Sequences with motif4.24%
Number of Background Sequences with motif473.4
Percentage of Background Sequences with motif1.01%
Average Position of motif in Targets52.7 +/- 26.3bp
Average Position of motif in Background51.0 +/- 31.0bp
Strand Bias (log2 ratio + to - strand density)0.5
Multiplicity (# of sites on avg that occur together)1.05
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

RUNX1(Runt)/Jurkat-RUNX1-ChIP-Seq(GSE29180)/Homer

Match Rank:1
Score:0.86
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTAG
NNTGTGGTTT--
 A C G T A C G T A G C T T C A G A C G T C A T G A T C G G A C T A C G T C G A T C T G A T C A G
A C G T G A C T C A G T A C T G G A C T A C T G A C T G A G C T A G C T C G A T A C G T A C G T

RUNX(Runt)/HPC7-Runx1-ChIP-Seq(GSE22178)/Homer

Match Rank:2
Score:0.82
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTAG
CTGTGGTTTN-
 A C G T A G C T T C A G A C G T C A T G A T C G G A C T A C G T C G A T C T G A T C A G
G A T C A C G T A C T G A G C T A C T G A C T G A G C T A G C T C G A T A T C G A C G T

RUNX1/MA0002.2/Jaspar

Match Rank:3
Score:0.82
Offset:-3
Orientation:forward strand
Alignment:---TGTGGTTTAG
GTCTGTGGTTT--
 A C G T A C G T A C G T A G C T T C A G A C G T C A T G A T C G G A C T A C G T C G A T C T G A T C A G
A C T G A G C T A G T C C G A T A T C G G A C T A C T G A C T G A G C T G A C T C G A T A C G T A C G T

RUNX-AML(Runt)/CD4+-PolII-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:4
Score:0.81
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTTTAG
GCTGTGGTTT--
 A C G T A C G T A G C T T C A G A C G T C A T G A T C G G A C T A C G T C G A T C T G A T C A G
A C T G G A T C G A C T A C T G A C G T C A T G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2(Runt)/PCa-RUNX2-ChIP-Seq(GSE33889)/Homer

Match Rank:5
Score:0.79
Offset:-3
Orientation:reverse strand
Alignment:---TGTGGTTTAG
NNHTGTGGTTWN-
 A C G T A C G T A C G T A G C T T C A G A C G T C A T G A T C G G A C T A C G T C G A T C T G A T C A G
C A T G C G A T G A C T A C G T A C T G A C G T A C T G A C T G A C G T A G C T C G A T A C T G A C G T

RUNX3/MA0684.1/Jaspar

Match Rank:6
Score:0.75
Offset:-2
Orientation:reverse strand
Alignment:--TGTGGTTTAG
TTTGCGGTTT--
 A C G T A C G T A G C T T C A G A C G T C A T G A T C G G A C T A C G T C G A T C T G A T C A G
C G A T A G C T A C G T T A C G A G T C A T C G A C T G A C G T A G C T C G A T A C G T A C G T

RUNX2/MA0511.2/Jaspar

Match Rank:7
Score:0.74
Offset:-1
Orientation:reverse strand
Alignment:-TGTGGTTTAG
TTGCGGTTT--
 A C G T A G C T T C A G A C G T C A T G A T C G G A C T A C G T C G A T C T G A T C A G
A G C T A C G T A C T G G A T C A C T G A C T G A C G T G A C T C G A T A C G T A C G T

FOXH1/MA0479.1/Jaspar

Match Rank:8
Score:0.72
Offset:0
Orientation:reverse strand
Alignment:TGTGGTTTAG-
TGTGGATTNNN
 A G C T T C A G A C G T C A T G A T C G G A C T A C G T C G A T C T G A T C A G A C G T
C G A T A C T G A C G T A C T G C A T G C G T A G C A T A C G T A T C G T C A G T C G A

Foxh1(Forkhead)/hESC-FOXH1-ChIP-Seq(GSE29422)/Homer

Match Rank:9
Score:0.71
Offset:-2
Orientation:forward strand
Alignment:--TGTGGTTTAG
NNTGTGGATTSS
 A C G T A C G T A G C T T C A G A C G T C A T G A T C G G A C T A C G T C G A T C T G A T C A G
C A T G G A C T G C A T A C T G A G C T A C T G A C T G C G T A G C A T A G C T A T C G T A C G

CRX(Homeobox)/Retina-Crx-ChIP-Seq(GSE20012)/Homer

Match Rank:10
Score:0.67
Offset:3
Orientation:reverse strand
Alignment:TGTGGTTTAG-
---GGATTAGC
 A G C T T C A G A C G T C A T G A T C G G A C T A C G T C G A T C T G A T C A G A C G T
A C G T A C G T A C G T T C A G T A C G T G C A C A G T G C A T C G T A C T A G T A G C