Information for 12-CTCTTTTCTGTGTGTA (Motif 20)

A G T C G A C T G A T C A C G T A C G T C A G T A G C T A T G C A C G T A T C G C G A T A C T G C G A T T C A G G C A T C T G A
Reverse Opposite:
G A C T C G T A A G T C C G T A T G A C C G T A T A G C C G T A T A C G C T G A G C T A T C G A T G C A C T A G C G T A A C T G
p-value:1e-6
log p-value:-1.595e+01
Information Content per bp:1.664
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif19.1
Percentage of Background Sequences with motif0.04%
Average Position of motif in Targets36.5 +/- 18.5bp
Average Position of motif in Background54.9 +/- 27.7bp
Strand Bias (log2 ratio + to - strand density)0.7
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0166.1_Sox12_2/Jaspar

Match Rank:1
Score:0.62
Offset:3
Orientation:reverse strand
Alignment:CTCTTTTCTGTGTGTA---
---ANTCCTTTGTCTNNNN
 A G T C G A C T G A T C A C G T A C G T C A G T A G C T A T G C A C G T A T C G C G A T A C T G C G A T T C A G G C A T C T G A A C G T A C G T A C G T
A C G T A C G T A C G T C G T A G C A T A C G T A G T C A T G C C G A T A G C T C G A T T C A G A C G T T A G C G A C T T C A G G C A T A C G T A C G T

PB0168.1_Sox14_2/Jaspar

Match Rank:2
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-CTCTTTTCTGTGTGTA
NNNCCATTGTGTNAN--
 A C G T A G T C G A C T G A T C A C G T A C G T C A G T A G C T A T G C A C G T A T C G C G A T A C T G C G A T T C A G G C A T C T G A
A T C G T G A C A C T G A G T C G A T C C G T A A C G T A C G T T A C G G C A T A T C G A G C T T C A G T G C A T C A G A C G T A C G T

Sox3/MA0514.1/Jaspar

Match Rank:3
Score:0.53
Offset:2
Orientation:forward strand
Alignment:CTCTTTTCTGTGTGTA
--CCTTTGTTTT----
 A G T C G A C T G A T C A C G T A C G T C A G T A G C T A T G C A C G T A T C G C G A T A C T G C G A T T C A G G C A T C T G A
A C G T A C G T A T G C A G T C C G A T A C G T A C G T A T C G A C G T A G C T A G C T A G C T A C G T A C G T A C G T A C G T

Gata1/MA0035.3/Jaspar

Match Rank:4
Score:0.53
Offset:0
Orientation:forward strand
Alignment:CTCTTTTCTGTGTGTA
TTCTTATCTGT-----
 A G T C G A C T G A T C A C G T A C G T C A G T A G C T A T G C A C G T A T C G C G A T A C T G C G A T T C A G G C A T C T G A
A G C T A G C T A G T C A G C T A C G T C G T A A C G T A G T C C G A T A T C G G A C T A C G T A C G T A C G T A C G T A C G T

SOX10/MA0442.1/Jaspar

Match Rank:5
Score:0.52
Offset:7
Orientation:forward strand
Alignment:CTCTTTTCTGTGTGTA
-------CTTTGT---
 A G T C G A C T G A T C A C G T A C G T C A G T A G C T A T G C A C G T A T C G C G A T A C T G C G A T T C A G G C A T C T G A
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C C G A T A C G T A C G T A T C G A C G T A C G T A C G T A C G T

PB0016.1_Foxj1_1/Jaspar

Match Rank:6
Score:0.51
Offset:4
Orientation:reverse strand
Alignment:CTCTTTTCTGTGTGTA----
----NNNNTTTGTTTACNNT
 A G T C G A C T G A T C A C G T A C G T C A G T A G C T A T G C A C G T A T C G C G A T A C T G C G A T T C A G G C A T C T G A A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T G T C A G T C A G C A T C A G T G C A T C A G T C G A T C T A G C G A T C G A T C A G T C T G A A G T C C G A T G C A T C G A T

FOXP1/MA0481.1/Jaspar

Match Rank:7
Score:0.51
Offset:7
Orientation:reverse strand
Alignment:CTCTTTTCTGTGTGTA------
-------CTTTGTTTACTTTTN
 A G T C G A C T G A T C A C G T A C G T C A G T A G C T A T G C A C G T A T C G C G A T A C T G C G A T T C A G G C A T C T G A A C G T A C G T A C G T A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A G T C G C A T A C G T A C G T A C T G A C G T A C G T A C G T C G T A A G T C G A C T A G C T G C A T C G A T C A T G

Gata4/MA0482.1/Jaspar

Match Rank:8
Score:0.51
Offset:1
Orientation:forward strand
Alignment:CTCTTTTCTGTGTGTA
-TCTTATCTCCC----
 A G T C G A C T G A T C A C G T A C G T C A G T A G C T A T G C A C G T A T C G C G A T A C T G C G A T T C A G G C A T C T G A
A C G T A G C T A T G C A G C T A C G T G T C A A C G T A G T C C G A T A T G C G A T C A G T C A C G T A C G T A C G T A C G T

GATA3/MA0037.2/Jaspar

Match Rank:9
Score:0.50
Offset:1
Orientation:reverse strand
Alignment:CTCTTTTCTGTGTGTA
-TCTTATCT-------
 A G T C G A C T G A T C A C G T A C G T C A G T A G C T A T G C A C G T A T C G C G A T A C T G C G A T T C A G G C A T C T G A
A C G T A G C T A G T C A C G T A C G T C G T A A C G T A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0021.1_Gata3_1/Jaspar

Match Rank:10
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------CTCTTTTCTGTGTGTA
NNTNANTTCTTATCTCTANANN
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C G A C T G A T C A C G T A C G T C A G T A G C T A T G C A C G T A T C G C G A T A C T G C G A T T C A G G C A T C T G A
G T A C A G C T C A G T G C A T T G C A C G A T G A C T A C G T A T G C C G A T C G A T C G T A A C G T A G T C C G A T G T A C G A C T G C T A G C T A C G T A G T C A T C G A