Information for 11-GCCGGSCMMGCRSGRA (Motif 18)

A T C G A T G C A G T C A C T G C T A G A T G C A G T C G T A C T G A C A C T G G T A C C T G A A T C G A C T G C T G A C G T A
Reverse Opposite:
A C G T A G C T A G T C A T G C A G C T A C T G A G T C A C T G A C T G A C T G A T C G A G T C A G T C A C T G A T C G A T G C
p-value:1e-9
log p-value:-2.115e+01
Information Content per bp:1.841
Number of Target Sequences with motif5.0
Percentage of Target Sequences with motif0.56%
Number of Background Sequences with motif2.6
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets45.4 +/- 19.3bp
Average Position of motif in Background36.5 +/- 10.9bp
Strand Bias (log2 ratio + to - strand density)-0.6
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0010.1_Egr1_1/Jaspar

Match Rank:1
Score:0.57
Offset:0
Orientation:forward strand
Alignment:GCCGGSCMMGCRSGRA
TCCGCCCCCGCATT--
 A T C G A T G C A G T C A C T G C T A G A T G C A G T C G T A C T G A C A C T G G T A C C T G A A T C G A C T G C T G A C G T A
G A C T G T A C G A T C T C A G A G T C A T G C A G T C G T A C G A T C A C T G A G T C C G T A G A C T A C G T A C G T A C G T

EGR2/MA0472.2/Jaspar

Match Rank:2
Score:0.55
Offset:1
Orientation:forward strand
Alignment:GCCGGSCMMGCRSGRA
-ACGCCCACGCA----
 A T C G A T G C A G T C A C T G C T A G A T G C A G T C G T A C T G A C A C T G G T A C C T G A A T C G A C T G C T G A C G T A
A C G T G T C A A G T C C T A G A G T C T G A C A G T C T G C A A G T C C A T G A G T C C T G A A C G T A C G T A C G T A C G T

EGR3/MA0732.1/Jaspar

Match Rank:3
Score:0.54
Offset:-1
Orientation:forward strand
Alignment:-GCCGGSCMMGCRSGRA
CTACGCCCACGCACT--
 A C G T A T C G A T G C A G T C A C T G C T A G A T G C A G T C G T A C T G A C A C T G G T A C C T G A A T C G A C T G C T G A C G T A
G A T C G A C T G T C A G A T C C T A G A T G C A G T C A G T C T G C A A T G C T C A G G A T C C T G A G A T C G C A T A C G T A C G T

E2F1(E2F)/Hela-E2F1-ChIP-Seq(GSE22478)/Homer

Match Rank:4
Score:0.54
Offset:6
Orientation:forward strand
Alignment:GCCGGSCMMGCRSGRA
------CWGGCGGGAA
 A T C G A T G C A G T C A C T G C T A G A T G C A G T C G T A C T G A C A C T G G T A C C T G A A T C G A C T G C T G A C G T A
A C G T A C G T A C G T A C G T A C G T A C G T T A G C C G A T T A C G A C T G A G T C A C T G A T C G A T C G C G T A C T G A

E2F4(E2F)/K562-E2F4-ChIP-Seq(GSE31477)/Homer

Match Rank:5
Score:0.53
Offset:8
Orientation:forward strand
Alignment:GCCGGSCMMGCRSGRA--
--------GGCGGGAAAH
 A T C G A T G C A G T C A C T G C T A G A T G C A G T C G T A C T G A C A C T G G T A C C T G A A T C G A C T G C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G T A C G T A C G G T C A C T G A C G T A G A C T

Zic3(Zf)/mES-Zic3-ChIP-Seq(GSE37889)/Homer

Match Rank:6
Score:0.53
Offset:4
Orientation:reverse strand
Alignment:GCCGGSCMMGCRSGRA---
----DCHCAGCAGGRGGCC
 A T C G A T G C A G T C A C T G C T A G A T G C A G T C G T A C T G A C A C T G G T A C C T G A A T C G A C T G C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T C A T G T G A C G T C A A T G C G C T A T A C G A G T C C T G A C A T G A T C G C T A G C T A G A T C G A T G C G T A C

E2F6(E2F)/Hela-E2F6-ChIP-Seq(GSE31477)/Homer

Match Rank:7
Score:0.52
Offset:8
Orientation:forward strand
Alignment:GCCGGSCMMGCRSGRA--
--------GGCGGGAARN
 A T C G A T G C A G T C A C T G C T A G A T G C A G T C G T A C T G A C A C T G G T A C C T G A A T C G A C T G C T G A C G T A A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T T A C G T A C G G T A C A T C G A C T G T A C G T C G A C T G A T C G A A T C G

E2F7(E2F)/Hela-E2F7-ChIP-Seq(GSE32673)/Homer

Match Rank:8
Score:0.52
Offset:7
Orientation:reverse strand
Alignment:GCCGGSCMMGCRSGRA---
-------TGGCGGGAAAHB
 A T C G A T G C A G T C A C T G C T A G A T G C A G T C G T A C T G A C A C T G G T A C C T G A A T C G A C T G C T G A C G T A A C G T A C G T A C G T
A C G T A C G T A C G T A C G T A C G T A C G T A C G T C G A T T A C G A T C G G T A C A C T G A T C G A C T G C T G A C T G A T G C A G C T A A T C G

Pax8(Paired,Homeobox)/Thyroid-Pax8-ChIP-Seq(GSE26938)/Homer

Match Rank:9
Score:0.52
Offset:1
Orientation:reverse strand
Alignment:GCCGGSCMMGCRSGRA
-SCAGYCADGCATGAC
 A T C G A T G C A G T C A C T G C T A G A T G C A G T C G T A C T G A C A C T G G T A C C T G A A T C G A C T G C T G A C G T A
A C G T A T C G G T A C C G T A A T C G A G C T A T G C C G T A C T A G A T C G A G T C T C G A C A G T T C A G T C G A T G A C

EGR1/MA0162.2/Jaspar

Match Rank:10
Score:0.51
Offset:-2
Orientation:forward strand
Alignment:--GCCGGSCMMGCRSGRA
CCCCCGCCCCCGCC----
 A C G T A C G T A T C G A T G C A G T C A C T G C T A G A T G C A G T C G T A C T G A C A C T G G T A C C T G A A T C G A C T G C T G A C G T A
A T G C G A T C A G T C G T A C G A T C C T A G A G T C A G T C A G T C G T A C A G T C C A T G A T G C T G A C A C G T A C G T A C G T A C G T