Information for 11-TCGCCTTATG (Motif 13)

A C G T A G T C A T C G A T G C T G A C C A G T A C G T T C G A A C G T C T A G
Reverse Opposite:
G A T C T G C A A G C T G T C A G T C A A C T G A T C G T A G C T C A G T G C A
p-value:1e-11
log p-value:-2.588e+01
Information Content per bp:1.683
Number of Target Sequences with motif35.0
Percentage of Target Sequences with motif3.91%
Number of Background Sequences with motif444.1
Percentage of Background Sequences with motif0.95%
Average Position of motif in Targets45.3 +/- 23.9bp
Average Position of motif in Background50.3 +/- 28.3bp
Strand Bias (log2 ratio + to - strand density)-0.3
Multiplicity (# of sites on avg that occur together)1.06
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

Neurog1/MA0623.1/Jaspar

Match Rank:1
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCGCCTTATG--
--ACCATATGGT
 A C G T A G T C A T C G A T G C T G A C C A G T A C G T T C G A A C G T C T A G A C G T A C G T
A C G T A C G T C T G A T A G C T G A C C T G A A C G T T G C A G A C T C A T G A C T G A G C T

NEUROD2/MA0668.1/Jaspar

Match Rank:2
Score:0.63
Offset:2
Orientation:forward strand
Alignment:TCGCCTTATG--
--GCCATATGGT
 A C G T A G T C A T C G A T G C T G A C C A G T A C G T T C G A A C G T C T A G A C G T A C G T
A C G T A C G T T C A G T G A C A T G C C T G A A G C T T G C A A G C T A C T G A C T G G A C T

HLTF/MA0109.1/Jaspar

Match Rank:3
Score:0.61
Offset:1
Orientation:forward strand
Alignment:TCGCCTTATG-
-AACCTTATAT
 A C G T A G T C A T C G A T G C T G A C C A G T A C G T T C G A A C G T C T A G A C G T
A C G T C G T A G C T A G T A C A G T C C G A T A C G T C G T A A C G T T C G A G A C T

SF1(NR)/H295R-Nr5a1-ChIP-Seq(GSE44220)/Homer

Match Rank:4
Score:0.60
Offset:-2
Orientation:reverse strand
Alignment:--TCGCCTTATG
BNTGDCCTTG--
 A C G T A C G T A C G T A G T C A T C G A T G C T G A C C A G T A C G T T C G A A C G T C T A G
A T G C C A T G A C G T C T A G C T G A T G A C T G A C G A C T G C A T A C T G A C G T A C G T

Olig2(bHLH)/Neuron-Olig2-ChIP-Seq(GSE30882)/Homer

Match Rank:5
Score:0.60
Offset:2
Orientation:forward strand
Alignment:TCGCCTTATG--
--RCCATMTGTT
 A C G T A G T C A T C G A T G C T G A C C A G T A C G T T C G A A C G T C T A G A C G T A C G T
A C G T A C G T C T G A T G A C T G A C C G T A A C G T T G A C A G C T C T A G A C G T G A C T

Bhlha15/MA0607.1/Jaspar

Match Rank:6
Score:0.58
Offset:3
Orientation:forward strand
Alignment:TCGCCTTATG-
---CCATATGT
 A C G T A G T C A T C G A T G C T G A C C A G T A C G T T C G A A C G T C T A G A C G T
A C G T A C G T A C G T T A G C A G T C C G T A A C G T G T C A A C G T A C T G A G C T

SD0002.1_at_AC_acceptor/Jaspar

Match Rank:7
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----TCGCCTTATG
NNACTTGCCTT---
 A C G T A C G T A C G T A C G T A C G T A G T C A T C G A T G C T G A C C A G T A C G T T C G A A C G T C T A G
T C G A G A T C T G C A A G T C G A C T A G C T A C T G A G T C G A T C G C A T A C G T A C G T A C G T A C G T

Twist2/MA0633.1/Jaspar

Match Rank:8
Score:0.58
Offset:2
Orientation:forward strand
Alignment:TCGCCTTATG--
--ACCATATGTT
 A C G T A G T C A T C G A T G C T G A C C A G T A C G T T C G A A C G T C T A G A C G T A C G T
A C G T A C G T C T G A G T A C A G T C C G T A A G C T C T G A A C G T A C T G A C G T A C G T

YY2/MA0748.1/Jaspar

Match Rank:9
Score:0.57
Offset:-2
Orientation:forward strand
Alignment:--TCGCCTTATG
GTCCGCCATTA-
 A C G T A C G T A C G T A G T C A T C G A T G C T G A C C A G T A C G T T C G A A C G T C T A G
C T A G C G A T G A T C A T G C T A C G T G A C A G T C C G T A C G A T G A C T C G T A A C G T

Atoh1/MA0461.2/Jaspar

Match Rank:10
Score:0.57
Offset:2
Orientation:reverse strand
Alignment:TCGCCTTATG--
--ANCATATGTT
 A C G T A G T C A T C G A T G C T G A C C A G T A C G T T C G A A C G T C T A G A C G T A C G T
A C G T A C G T C T G A T G C A G T A C G C T A A C G T G T C A A G C T A C T G A C G T A G C T