Information for 10-GGCGCGACGGTGA (Motif 10)

C T A G A C T G G T A C A C T G A G T C A T C G C T G A G A T C A C T G A C T G C G A T A C T G C G T A
Reverse Opposite:
A C G T A G T C C G T A T A G C G T A C C T A G A G C T A T G C A C T G A G T C C A T G A G T C A G T C
p-value:1e-11
log p-value:-2.661e+01
Information Content per bp:1.809
Number of Target Sequences with motif7.0
Percentage of Target Sequences with motif0.78%
Number of Background Sequences with motif4.9
Percentage of Background Sequences with motif0.01%
Average Position of motif in Targets56.1 +/- 17.9bp
Average Position of motif in Background49.0 +/- 17.2bp
Strand Bias (log2 ratio + to - strand density)0.4
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0113.1_E2F3_2/Jaspar

Match Rank:1
Score:0.58
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCGACGGTGA
AGCTCGGCGCCAAAAGC-
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G G T A C A C T G A G T C A T C G C T G A G A T C A C T G A C T G C G A T A C T G C G T A
G T A C A T C G G A C T C G A T G A T C C T A G A T C G G T A C C A T G T A G C G A T C C G T A G T C A C T G A T G C A A T C G A T G C A C G T

PB0112.1_E2F2_2/Jaspar

Match Rank:2
Score:0.57
Offset:-5
Orientation:forward strand
Alignment:-----GGCGCGACGGTGA
CCTTCGGCGCCAAAAGG-
 A C G T A C G T A C G T A C G T A C G T C T A G A C T G G T A C A C T G A G T C A T C G C T G A G A T C A C T G A C T G C G A T A C T G C G T A
G A T C T A C G A G C T C G A T G A T C C T A G A T C G T G A C C A T G T A G C G A T C C T G A G T C A C T G A T C G A A C T G A T C G A C G T

PB0131.1_Gmeb1_2/Jaspar

Match Rank:3
Score:0.56
Offset:0
Orientation:forward strand
Alignment:GGCGCGACGGTGA---
TGGGCGACGTCGTTAA
 C T A G A C T G G T A C A C T G A G T C A T C G C T G A G A T C A C T G A C T G C G A T A C T G C G T A A C G T A C G T A C G T
C A G T C A T G T C A G A C T G G T A C T C A G G C T A T A G C A C T G C A G T A G T C C A T G G A C T A G C T G T C A G C T A

POL013.1_MED-1/Jaspar

Match Rank:4
Score:0.55
Offset:-1
Orientation:reverse strand
Alignment:-GGCGCGACGGTGA
CGGAGC--------
 A C G T C T A G A C T G G T A C A C T G A G T C A T C G C T G A G A T C A C T G A C T G C G A T A C T G C G T A
A T G C A C T G A C T G C G T A A C T G A G T C A C G T A C G T A C G T A C G T A C G T A C G T A C G T A C G T

PB0151.1_Myf6_2/Jaspar

Match Rank:5
Score:0.53
Offset:0
Orientation:reverse strand
Alignment:GGCGCGACGGTGA--
GGNGCGNCTGTTNNN
 C T A G A C T G G T A C A C T G A G T C A T C G C T G A G A T C A C T G A C T G C G A T A C T G C G T A A C G T A C G T
C T A G A C T G G A C T A T C G A T G C A T C G A C T G G A T C A G C T C T A G A C G T A G C T A C T G A T G C A G C T

E2F1/MA0024.3/Jaspar

Match Rank:6
Score:0.53
Offset:-3
Orientation:forward strand
Alignment:---GGCGCGACGGTGA
TTTGGCGCCAAA----
 A C G T A C G T A C G T C T A G A C T G G T A C A C T G A G T C A T C G C T G A G A T C A C T G A C T G C G A T A C T G C G T A
G C A T C G A T C G A T T A C G A T C G A G T C A T C G T A G C A G T C G T C A G C T A C G T A A C G T A C G T A C G T A C G T

Rfx1/MA0509.1/Jaspar

Match Rank:7
Score:0.52
Offset:0
Orientation:reverse strand
Alignment:GGCGCGACGGTGA-
GTTGCCATGGNAAC
 C T A G A C T G G T A C A C T G A G T C A T C G C T G A G A T C A C T G A C T G C G A T A C T G C G T A A C G T
A C T G A G C T G A C T C A T G A G T C A G T C C G T A C G A T C T A G T C A G T G A C C T G A T G C A G A T C

Rfx1(HTH)/NPC-H3K4me1-ChIP-Seq(GSE16256)/Homer

Match Rank:8
Score:0.50
Offset:-1
Orientation:forward strand
Alignment:-GGCGCGACGGTGA
NGTTGCCATGGCAA
 A C G T C T A G A C T G G T A C A C T G A G T C A T C G C T G A G A T C A C T G A C T G C G A T A C T G C G T A
A C T G T C A G A G C T G A C T C A T G A G T C A G T C G C T A C G A T C T A G T C A G G T A C C T G A T C G A

PB0050.1_Osr1_1/Jaspar

Match Rank:9
Score:0.50
Offset:-1
Orientation:reverse strand
Alignment:-GGCGCGACGGTGA--
TNNTGCTACTGTNNNN
 A C G T C T A G A C T G G T A C A C T G A G T C A T C G C T G A G A T C A C T G A C T G C G A T A C T G C G T A A C G T A C G T
G A C T C G A T A C G T C G A T T C A G A G T C A G C T G C T A A G T C A G C T C T A G A C G T C G T A G C T A C G T A C G A T

PB0199.1_Zfp161_2/Jaspar

Match Rank:10
Score:0.50
Offset:-6
Orientation:reverse strand
Alignment:------GGCGCGACGGTGA
NNGCNCTGCGCGGC-----
 A C G T A C G T A C G T A C G T A C G T A C G T C T A G A C T G G T A C A C T G A G T C A T C G C T G A G A T C A C T G A C T G C G A T A C T G C G T A
T C G A A G T C C A T G G A T C T G C A G A T C C A G T A C T G A G T C C T A G A T G C C T A G C T A G G T A C A C G T A C G T A C G T A C G T A C G T