Information for 4-CGGCCCAGAMACC (Motif 7)

G T A C C T A G A C T G A G T C A G T C A G T C C T G A A C T G G C T A T G A C C G T A A G T C G T A C
Reverse Opposite:
A C T G T A C G C G A T A C G T C G A T A G T C A G C T A C T G A C T G A C T G A G T C A G T C A C T G
p-value:1e-10
log p-value:-2.390e+01
Information Content per bp:1.790
Number of Target Sequences with motif8.0
Percentage of Target Sequences with motif0.94%
Number of Background Sequences with motif11.5
Percentage of Background Sequences with motif0.02%
Average Position of motif in Targets39.6 +/- 26.0bp
Average Position of motif in Background46.9 +/- 34.9bp
Strand Bias (log2 ratio + to - strand density)1.0
Multiplicity (# of sites on avg that occur together)1.12
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

ZNF416(Zf)/HEK293-ZNF416.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:1
Score:0.74
Offset:1
Orientation:reverse strand
Alignment:CGGCCCAGAMACC
-TGCCCAGNHW--
 G T A C C T A G A C T G A G T C A G T C A G T C C T G A A C T G G C T A T G A C C G T A A G T C G T A C
A C G T C G A T C A T G A G T C G A T C G T A C G C T A C T A G C A T G G A T C C G T A A C G T A C G T

ZNF711(Zf)/SHSY5Y-ZNF711-ChIP-Seq(GSE20673)/Homer

Match Rank:2
Score:0.66
Offset:0
Orientation:forward strand
Alignment:CGGCCCAGAMACC
AGGCCTAG-----
 G T A C C T A G A C T G A G T C A G T C A G T C C T G A A C T G G C T A T G A C C G T A A G T C G T A C
T G C A A C T G T A C G A T G C A G T C G A C T T C G A A T C G A C G T A C G T A C G T A C G T A C G T

THAP1/MA0597.1/Jaspar

Match Rank:3
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGGCCCAGAMACC
CTGCCCGCA----
 G T A C C T A G A C T G A G T C A G T C A G T C C T G A A C T G G C T A T G A C C G T A A G T C G T A C
A G T C G A C T C A T G G A T C G T A C G T A C C A T G A G T C G T C A A C G T A C G T A C G T A C G T

Smad4(MAD)/ESC-SMAD4-ChIP-Seq(GSE29422)/Homer

Match Rank:4
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CGGCCCAGAMACC-
----CCAGACRSVB
 G T A C C T A G A C T G A G T C A G T C A G T C C T G A A C T G G C T A T G A C C G T A A G T C G T A C A C G T
A C G T A C G T A C G T A C G T T A G C A G T C C G T A A C T G C G T A A G T C C T A G A T C G T A G C A T G C

Smad2(MAD)/ES-SMAD2-ChIP-Seq(GSE29422)/Homer

Match Rank:5
Score:0.60
Offset:4
Orientation:reverse strand
Alignment:CGGCCCAGAMACC
----CCAGACAG-
 G T A C C T A G A C T G A G T C A G T C A G T C C T G A A C T G G C T A T G A C C G T A A G T C G T A C
A C G T A C G T A C G T A C G T A T G C A G T C T G C A C T A G G T C A G T A C C T G A T A C G A C G T

PB0060.1_Smad3_1/Jaspar

Match Rank:6
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGGCCCAGAMACC---
CAAATCCAGACATCACA
 A C G T G T A C C T A G A C T G A G T C A G T C A G T C C T G A A C T G G C T A T G A C C G T A A G T C G T A C A C G T A C G T A C G T
G T A C C T G A C G T A C G T A C G A T A G T C A G T C T G C A C T A G G T C A G T A C C T G A A C G T A G T C G C T A T A C G G T C A

ZNF143|STAF(Zf)/CUTLL-ZNF143-ChIP-Seq(GSE29600)/Homer

Match Rank:7
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CGGCCCAGAMACC-
ATTTCCCAGVAKSCY
 A C G T G T A C C T A G A C T G A G T C A G T C A G T C C T G A A C T G G C T A T G A C C G T A A G T C G T A C A C G T
T G C A G C A T A G C T G C A T A G T C A G T C A G T C C T G A A C T G T C G A T C G A C A G T A T C G A G T C G A T C

Zfx/MA0146.2/Jaspar

Match Rank:8
Score:0.57
Offset:-1
Orientation:reverse strand
Alignment:-CGGCCCAGAMACC
CAGGCCNNGGCCNN
 A C G T G T A C C T A G A C T G A G T C A G T C A G T C C T G A A C T G G C T A T G A C C G T A A G T C G T A C
A T G C C T G A C T A G A C T G T A G C A G T C A C G T T G A C C T A G T A C G G A T C A T G C T A G C T A G C

ZFX(Zf)/mES-Zfx-ChIP-Seq(GSE11431)/Homer

Match Rank:9
Score:0.56
Offset:0
Orientation:forward strand
Alignment:CGGCCCAGAMACC
AGGCCTNG-----
 G T A C C T A G A C T G A G T C A G T C A G T C C T G A A C T G G C T A T G A C C G T A A G T C G T A C
C T G A A C T G A C T G A G T C A G T C A G C T C T A G T A C G A C G T A C G T A C G T A C G T A C G T

Sp1(Zf)/Promoter/Homer

Match Rank:10
Score:0.53
Offset:1
Orientation:forward strand
Alignment:CGGCCCAGAMACC
-GGCCCCGCCCCC
 G T A C C T A G A C T G A G T C A G T C A G T C C T G A A C T G G C T A T G A C C G T A A G T C G T A C
A C G T T A C G C T A G A T G C G A T C G T A C A G T C C T A G A G T C A G T C A G T C G T A C A G T C