Information for 1-CGCCCYCTDGTGG (Motif 2)

A G T C C T A G A T G C A G T C G T A C A G T C T G A C A G C T C G T A A T C G G C A T A C T G C T A G
Reverse Opposite:
A G T C A G T C C G T A T A G C G C A T T C G A A C T G C T A G A C T G A C T G A T C G G A T C C T A G
p-value:1e-48
log p-value:-1.115e+02
Information Content per bp:1.725
Number of Target Sequences with motif48.0
Percentage of Target Sequences with motif5.61%
Number of Background Sequences with motif111.8
Percentage of Background Sequences with motif0.23%
Average Position of motif in Targets58.2 +/- 22.8bp
Average Position of motif in Background49.1 +/- 24.8bp
Strand Bias (log2 ratio + to - strand density)-0.5
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

BORIS(Zf)/K562-CTCFL-ChIP-Seq(GSE32465)/Homer

Match Rank:1
Score:0.91
Offset:-6
Orientation:forward strand
Alignment:------CGCCCYCTDGTGG-
CNNBRGCGCCCCCTGSTGGC
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T A G A T G C A G T C G T A C A G T C T G A C A G C T C G T A A T C G G C A T A C T G C T A G A C G T
T A G C A G T C T G A C A G T C C T A G A T C G A G T C C A T G T G A C A G T C G T A C A G T C A G T C G C A T C T A G A T C G G C A T A C T G A T C G G A T C

CTCF/MA0139.1/Jaspar

Match Rank:2
Score:0.90
Offset:-3
Orientation:reverse strand
Alignment:---CGCCCYCTDGTGG---
TAGCGCCCCCTGGTGGCCA
 A C G T A C G T A C G T A G T C C T A G A T G C A G T C G T A C A G T C T G A C A G C T C G T A A T C G G C A T A C T G C T A G A C G T A C G T A C G T
A G C T C T G A A T C G G A T C C A T G G T A C G A T C G T A C G A T C G A T C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

CTCF(Zf)/CD4+-CTCF-ChIP-Seq(Barski_et_al.)/Homer

Match Rank:3
Score:0.88
Offset:-4
Orientation:forward strand
Alignment:----CGCCCYCTDGTGG---
ANAGTGCCACCTGGTGGCCA
 A C G T A C G T A C G T A C G T A G T C C T A G A T G C A G T C G T A C A G T C T G A C A G C T C G T A A T C G G C A T A C T G C T A G A C G T A C G T A C G T
T G C A A G C T C T G A A T C G G A C T C T A G G T A C G A T C G T C A A G T C G T A C G A C T C T A G A T C G G C A T C A T G C A T G G A T C G T A C C T G A

PB0076.1_Sp4_1/Jaspar

Match Rank:4
Score:0.68
Offset:-5
Orientation:forward strand
Alignment:-----CGCCCYCTDGTGG
GGTCCCGCCCCCTTCTC-
 A C G T A C G T A C G T A C G T A C G T A G T C C T A G A T G C A G T C G T A C A G T C T G A C A G C T C G T A A T C G G C A T A C T G C T A G
A C T G C A T G G A C T G T A C G T A C A G T C C T A G A G T C A T G C A G T C G T A C A G T C G A C T G A C T T A G C A G C T A G T C A C G T

PB0101.1_Zic1_1/Jaspar

Match Rank:5
Score:0.64
Offset:1
Orientation:reverse strand
Alignment:CGCCCYCTDGTGG--
-CCCCCCCGGGGGNN
 A G T C C T A G A T G C A G T C G T A C A G T C T G A C A G C T C G T A A T C G G C A T A C T G C T A G A C G T A C G T
A C G T T A G C T G A C G A T C G T A C G T A C A T G C T A G C A T C G T A C G A C T G A C T G C A T G C A G T T A C G

PB0103.1_Zic3_1/Jaspar

Match Rank:6
Score:0.62
Offset:0
Orientation:forward strand
Alignment:CGCCCYCTDGTGG--
CCCCCCCGGGGGGGT
 A G T C C T A G A T G C A G T C G T A C A G T C T G A C A G C T C G T A A T C G G C A T A C T G C T A G A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G T A C G A C T G C A T G C A T G C A T G A T C G A G C T

PB0102.1_Zic2_1/Jaspar

Match Rank:7
Score:0.61
Offset:0
Orientation:forward strand
Alignment:CGCCCYCTDGTGG--
CCCCCCCGGGGGGGT
 A G T C C T A G A T G C A G T C G T A C A G T C T G A C A G C T C G T A A T C G G C A T A C T G C T A G A C G T A C G T
A T G C G T A C G T A C G T A C G T A C A T G C T A G C A C T G A T C G A C T G C A T G C A T G C A T G A T C G A C G T

KLF14(Zf)/HEK293-KLF14.GFP-ChIP-Seq(GSE58341)/Homer

Match Rank:8
Score:0.60
Offset:-4
Orientation:reverse strand
Alignment:----CGCCCYCTDGTGG
GCCMCGCCCMCY-----
 A C G T A C G T A C G T A C G T A G T C C T A G A T G C A G T C G T A C A G T C T G A C A G C T C G T A A T C G G C A T A C T G C T A G
T A C G A G T C G A T C T G A C G A T C C T A G A G T C A G T C A G T C G T C A A G T C G A T C A C G T A C G T A C G T A C G T A C G T

ZIC1/MA0696.1/Jaspar

Match Rank:9
Score:0.60
Offset:-2
Orientation:forward strand
Alignment:--CGCCCYCTDGTGG
GACCCCCCGCTGTG-
 A C G T A C G T A G T C C T A G A T G C A G T C G T A C A G T C T G A C A G C T C G T A A T C G G C A T A C T G C T A G
A C T G T C G A G T A C G T A C G T A C A G T C G T A C G A T C T C A G A G T C A C G T T C A G G A C T A C T G A C G T

KLF13/MA0657.1/Jaspar

Match Rank:10
Score:0.59
Offset:-6
Orientation:forward strand
Alignment:------CGCCCYCTDGTGG
ATGCCACGCCCCTTTTTG-
 A C G T A C G T A C G T A C G T A C G T A C G T A G T C C T A G A T G C A G T C G T A C A G T C T G A C A G C T C G T A A T C G G C A T A C T G C T A G
C T G A C A G T C T A G G T A C G T A C C T G A A T G C C T A G A G T C G T A C G A T C G T A C A G C T G A C T C A G T C A G T C A G T C A T G A C G T