Information for 11-CTCGTACTAT (Motif 15)

A T G C A G C T A T G C A C T G A C G T G C T A G A T C C G A T T G C A G C A T
Reverse Opposite:
C G T A A C G T C G T A C T A G C G A T T C G A T G A C T A C G T C G A A T C G
p-value:1e-1
log p-value:-4.044e+00
Information Content per bp:1.635
Number of Target Sequences with motif1.0
Percentage of Target Sequences with motif0.12%
Number of Background Sequences with motif1.4
Percentage of Background Sequences with motif0.00%
Average Position of motif in Targets95.0 +/- 0.0bp
Average Position of motif in Background48.0 +/- 0.0bp
Strand Bias (log2 ratio + to - strand density)10.0
Multiplicity (# of sites on avg that occur together)1.00
Motif File:file (matrix)
reverse opposite
SVG Files for Logos:forward logo
reverse opposite

Matches to Known Motifs

PB0094.1_Zfp128_1/Jaspar

Match Rank:1
Score:0.60
Offset:-5
Orientation:forward strand
Alignment:-----CTCGTACTAT--
TCTTTGGCGTACCCTAA
 A C G T A C G T A C G T A C G T A C G T A T G C A G C T A T G C A C T G A C G T G C T A G A T C C G A T T G C A G C A T A C G T A C G T
A C G T G A T C G C A T C A G T C A G T C A T G C T A G A G T C C T A G A C G T C G T A G T A C T A G C A G T C A G C T G T C A C T G A

PH0048.1_Hoxa13/Jaspar

Match Rank:2
Score:0.59
Offset:-4
Orientation:forward strand
Alignment:----CTCGTACTAT--
AAACCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A T G C A G C T A T G C A C T G A C G T G C T A G A T C C G A T T G C A G C A T A C G T A C G T
G C T A C G T A G C T A A T C G T A G C A G C T G A T C C T A G A G C T C G T A C G T A G C T A G C T A G C A T A C G T C G A T

PB0137.1_Irf3_2/Jaspar

Match Rank:3
Score:0.58
Offset:-4
Orientation:reverse strand
Alignment:----CTCGTACTAT
NNGCACCTTTCTCC
 A C G T A C G T A C G T A C G T A T G C A G C T A T G C A C T G A C G T G C T A G A T C C G A T T G C A G C A T
A G C T G A T C T C A G T A G C G C T A A T G C T A G C G C A T C G A T G C A T G A T C G C A T G T A C G A T C

HOXC13/MA0907.1/Jaspar

Match Rank:4
Score:0.58
Offset:-1
Orientation:forward strand
Alignment:-CTCGTACTAT
GCTCGTAAAAA
 A C G T A T G C A G C T A T G C A C T G A C G T G C T A G A T C C G A T T G C A G C A T
A C T G T A G C A G C T G A T C C T A G A C G T C G T A G C T A C G T A G C T A G C T A

PH0068.1_Hoxc13/Jaspar

Match Rank:5
Score:0.57
Offset:-4
Orientation:forward strand
Alignment:----CTCGTACTAT--
AAAGCTCGTAAAATTT
 A C G T A C G T A C G T A C G T A T G C A G C T A T G C A C T G A C G T G C T A G A T C C G A T T G C A G C A T A C G T A C G T
G C A T G C T A C G T A A C T G T A G C A G C T G A T C C T A G A G C T C G T A C G T A C G T A G C T A G C A T A G C T C G A T

PRDM1(Zf)/Hela-PRDM1-ChIP-Seq(GSE31477)/Homer

Match Rank:6
Score:0.56
Offset:1
Orientation:forward strand
Alignment:CTCGTACTAT---
-ACTTTCACTTTC
 A T G C A G C T A T G C A C T G A C G T G C T A G A T C C G A T T G C A G C A T A C G T A C G T A C G T
A C G T T C G A T G A C G C A T A G C T C A G T G A T C G C T A G A T C G A C T A C G T G C A T A G T C

PB0194.1_Zbtb12_2/Jaspar

Match Rank:7
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTCGTACTAT-----
AGNGTTCTAATGANN
 A T G C A G C T A T G C A C T G A C G T G C T A G A T C C G A T T G C A G C A T A C G T A C G T A C G T A C G T A C G T
G C T A T C A G T A G C C A T G C A G T C A G T G T A C A G C T G C T A G C T A A G C T T A C G C T G A A C G T C G T A

PU.1(ETS)/ThioMac-PU.1-ChIP-Seq(GSE21512)/Homer

Match Rank:8
Score:0.56
Offset:0
Orientation:reverse strand
Alignment:CTCGTACTAT
CACTTCCTCT
 A T G C A G C T A T G C A C T G A C G T G C T A G A T C C G A T T G C A G C A T
A T G C C T G A A T G C C G A T A C G T A G T C A G T C A G C T A T G C G C A T

HOXD12/MA0873.1/Jaspar

Match Rank:9
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTCGTACTAT
AGTCGTAAAAA
 A C G T A T G C A G C T A T G C A C T G A C G T G C T A G A T C C G A T T G C A G C A T
T C G A T C A G A G C T T A G C T C A G G A C T C G T A C T G A C G T A G C T A G T C A

HOXC12/MA0906.1/Jaspar

Match Rank:10
Score:0.55
Offset:-1
Orientation:forward strand
Alignment:-CTCGTACTAT
GGTCGTAAAAA
 A C G T A T G C A G C T A T G C A C T G A C G T G C T A G A T C C G A T T G C A G C A T
C T A G T C A G G A C T G T A C T C A G A G C T G C T A C G T A G C T A G T C A G C T A